Detailed information of evm.model.ptg000024l.482 in Aurelia coerulea

Genomic Location: chr16:8494560...8627387
NR annotation: XP_015750562.1, PREDICTED: tRNA (guanine-N(7)-)-methyltransferase non-catalytic subunit WDR4-like [Acropora digitifera]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
B3LGB9tRNA (guanine-N(7)-)-methyltransferase non-catalytic subunit TRM82 OS=Saccharomyces cerevisiae (strain RM11-1a) OX=285006 GN=TRM82 PE=3 SV=1
B5VG60tRNA (guanine-N(7)-)-methyltransferase non-catalytic subunit TRM82 OS=Saccharomyces cerevisiae (strain AWRI1631) OX=545124 GN=TRM82 PE=3 SV=1
A6ZYC3tRNA (guanine-N(7)-)-methyltransferase non-catalytic subunit TRM82 OS=Saccharomyces cerevisiae (strain YJM789) OX=307796 GN=TRM82 PE=3 SV=1
Gene familySubfamily
Ubiquitin FamilyUBD|Other|Beta-prp
Ubiquitin FamilyE3|E3 adaptor Cullin RING|DWD

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00400WD40WD domain, G-beta repeatRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036322Homologous_superfamilyWD40-repeat-containing domain superfamilyInterproscan
IPR001680RepeatWD40 repeatInterproscan
IPR015943Homologous_superfamilyWD40/YVTN repeat-like-containing domain superfamilyInterproscan
IPR019775Conserved_siteWD40 repeat, conserved siteInterproscan
IPR028884FamilytRNA (guanine-N(7)-)-methyltransferase non-catalytic subunitInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR16288WD40 REPEAT PROTEIN 4Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0005829Cellular ComponentcytosolInterproscan
GO:0006400Biological ProcesstRNA modificationInterproscan
GO:0036265Biological ProcessRNA (guanine-N7)-methylationInterproscan
GO:0043527Cellular ComponenttRNA methyltransferase complexInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K15443TRM82, WDR4; tRNA (guanine-N(7)-)-methyltransferase subunit TRM82-Transfer RNA biogenesisko03016deepkoala

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