Detailed information of evm.model.ptg000024l.527 in Aurelia coerulea

Genomic Location: chr16:7909027...7918497
NR annotation: PIC54909.1, hypothetical protein B9Z55_000401 [Caenorhabditis nigoni]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P56407Homeobox protein ceh-9 OS=Caenorhabditis elegans OX=6239 GN=ceh-9 PE=3 SV=2
Q9BZE3BarH-like 1 homeobox protein OS=Homo sapiens OX=9606 GN=BARHL1 PE=1 SV=1
P63157BarH-like 1 homeobox protein OS=Mus musculus OX=10090 GN=Barhl1 PE=2 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00046HomeodomainHomeodomainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR017970Conserved_siteHomeobox, conserved siteInterproscan
IPR001356DomainHomeobox domainInterproscan
IPR020479DomainHomeobox domain, metazoaInterproscan
IPR009057Homologous_superfamilyHomeobox-like domain superfamilyInterproscan
IPR050394FamilyHomeobox NK-like transcription regulatorsInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24340HOMEOBOX PROTEIN NKXInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0000981Molecular FunctionDNA-binding transcription factor activity, RNA polymerase II-specificInterproscan
GO:0006355Biological Processregulation of DNA-templated transcriptionInterproscan
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0000978Molecular FunctionRNA polymerase II cis-regulatory region sequence-specific DNA bindingInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006357Biological Processregulation of transcription by RNA polymerase IIInterproscan
GO:0030154Biological Processcell differentiationInterproscan

TOP