Gene detail

Detailed information of evm.model.ptg000024l.648 in Aurelia coerulea

Genomic Location: chr16:5318934...5324418
NR annotation: XP_028405067.1, histone H2A.V [Dendronephthya gigantea]

Gene Structure

Sequence

Uniprot

Uniprot term	Description
Q32LA7	Histone H2A.V OS=Bos taurus OX=9913 GN=H2AZ2 PE=2 SV=3
P02272	Histone H2A.V OS=Gallus gallus OX=9031 GN=H2AZ2 PE=1 SV=2
Q71PD7	Histone H2A.V OS=Danio rerio OX=7955 GN=h2az2a PE=2 SV=3

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF16211	Histone_H2A_C	C-terminus of histone H2A	Family	Interproscan
PF00125	Histone	Core histone H2A/H2B/H3/H4	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR009072	Homologous_superfamily	Histone-fold	Interproscan
IPR032458	Conserved_site	Histone H2A conserved site	Interproscan
IPR002119	Family	Histone H2A	Interproscan
IPR032454	Domain	Histone H2A, C-terminal domain	Interproscan
IPR007125	Domain	Histone H2A/H2B/H3	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR23430	HISTONE H2A	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0046982	Molecular Function	protein heterodimerization activity	Interproscan
GO:0000786	Cellular Component	nucleosome	Interproscan
GO:0003677	Molecular Function	DNA binding	Interproscan
GO:0030527	Molecular Function	structural constituent of chromatin	Interproscan
GO:0000790	Cellular Component	chromatin	Interproscan
GO:0006342	Biological Process	heterochromatin formation	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K11251	H2A; histone H2A	-	Exosome	ko04147	deepkoala