Detailed information of evm.model.ptg000024l.828 in Aurelia coerulea

Genomic Location: chr16:712642...776534
NR annotation: CAB3986484.1, scribble homolog isoform X1, partial [Paramuricea clavata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q4H4B6Protein scribble homolog OS=Danio rerio OX=7955 GN=scrib PE=1 SV=1
Q80U72Protein scribble homolog OS=Mus musculus OX=10090 GN=Scrib PE=1 SV=3
Q14160Protein scribble homolog OS=Homo sapiens OX=9606 GN=SCRIB PE=1 SV=6

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00595PDZPDZ domainDomainInterproscan
PF13855LRR_8Leucine rich repeatRepeatInterproscan
PF12799LRR_4Leucine Rich repeats (2 copies)RepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR032675Homologous_superfamilyLeucine-rich repeat domain superfamilyInterproscan
IPR003591RepeatLeucine-rich repeat, typical subtypeInterproscan
IPR036034Homologous_superfamilyPDZ superfamilyInterproscan
IPR050614FamilySynaptic Scaffolding LAP/MAGUK FamiliesInterproscan
IPR001478DomainPDZ domainInterproscan
IPR001611RepeatLeucine-rich repeatInterproscan
IPR025875RepeatLeucine rich repeat 4Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR23119DISCS LARGEInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005912Cellular Componentadherens junctionInterproscan
GO:0009790Biological Processembryo developmentInterproscan
GO:0016323Cellular Componentbasolateral plasma membraneInterproscan
GO:0030054Cellular Componentcell junctionInterproscan
GO:0043113Biological Processreceptor clusteringInterproscan
GO:0045197Biological Processestablishment or maintenance of epithelial cell apical/basal polarityInterproscan
GO:0097120Biological Processreceptor localization to synapseInterproscan
GO:0098609Biological Processcell-cell adhesionInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K16175SCRIB; protein scribble-Human papillomavirus infectionko05165deepkoala

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