Gene detail

Detailed information of evm.model.ptg000027l.181 in Aurelia coerulea

Genomic Location: chr9:2927707...2930247
NR annotation: AAD32577.1, Scox-3 homeodomain protein, partial [Cassiopea xamachana]

Gene Structure

Sequence

Uniprot

Gene family

Uniprot term	Description
P70118	Pancreas/duodenum homeobox protein 1 OS=Mesocricetus auratus OX=10036 GN=PDX1 PE=1 SV=1
P31267	Homeobox protein Hox-A6 OS=Homo sapiens OX=9606 GN=HOXA6 PE=1 SV=2
A1YG85	Pancreas/duodenum homeobox protein 1 OS=Pan paniscus OX=9597 GN=PDX1 PE=3 SV=1

Gene family	Subfamily
Transcription Factors Family	Homeobox

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00046	Homeodomain	Homeodomain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001356	Domain	Homeobox domain	Interproscan
IPR017970	Conserved_site	Homeobox, conserved site	Interproscan
IPR009057	Homologous_superfamily	Homeobox-like domain superfamily	Interproscan
IPR020479	Domain	Homeobox domain, metazoa	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR45664	PROTEIN ZERKNUELLT 1-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003677	Molecular Function	DNA binding	Interproscan
GO:0000981	Molecular Function	DNA-binding transcription factor activity, RNA polymerase II-specific	Interproscan
GO:0006355	Biological Process	regulation of DNA-templated transcription	Interproscan
GO:0000978	Molecular Function	RNA polymerase II cis-regulatory region sequence-specific DNA binding	Interproscan
GO:0005634	Cellular Component	nucleus	Interproscan
GO:0006357	Biological Process	regulation of transcription by RNA polymerase II	Interproscan