Detailed information of evm.model.ptg000027l.239 in Aurelia coerulea

Genomic Location: chr9:4417043...4447316
NR annotation: XP_022796242.1, DNA polymerase lambda-like [Stylophora pistillata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q9UGP5DNA polymerase lambda OS=Homo sapiens OX=9606 GN=POLL PE=1 SV=1
Q9QXE2DNA polymerase lambda OS=Mus musculus OX=10090 GN=Poll PE=2 SV=1
Q5RKI3DNA polymerase lambda OS=Rattus norvegicus OX=10116 GN=Poll PE=2 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF05729NACHTNACHT domainDomainInterproscan
PF14716HHH_8Helix-hairpin-helix domainDomainInterproscan
PF14791DNA_pol_B_thumbDNA polymerase beta thumb FamilyInterproscan
PF14792DNA_pol_B_palmDNA polymerase beta palm DomainInterproscan
PF10391DNA_pol_lambd_fFingers domain of DNA polymerase lambdaDomainInterproscan
PF00533BRCTBRCA1 C Terminus (BRCT) domainFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR019843Binding_siteDNA polymerase family X, binding siteInterproscan
IPR007111DomainNACHT nucleoside triphosphataseInterproscan
IPR022312FamilyDNA polymerase family XInterproscan
IPR027421Homologous_superfamilyDNA polymerase lambda lyase domain superfamilyInterproscan
IPR037160Homologous_superfamilyDNA polymerase, thumb domain superfamilyInterproscan
IPR010996DomainDNA polymerase beta-like, N-terminal domainInterproscan
IPR029398DomainDNA polymerase beta, thumb domainInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR028207DomainDNA polymerase beta, palm domainInterproscan
IPR002008FamilyDNA polymerase family X, beta-likeInterproscan
IPR018944DomainDNA polymerase lambda, fingers domainInterproscan
IPR036420Homologous_superfamilyBRCT domain superfamilyInterproscan
IPR002054DomainDNA-directed DNA polymerase XInterproscan
IPR001357DomainBRCT domainInterproscan
IPR043519Homologous_superfamilyNucleotidyltransferase superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11276DNA POLYMERASE TYPE-X FAMILY MEMBERInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0016779Molecular Functionnucleotidyltransferase activityInterproscan
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0003887Molecular FunctionDNA-directed DNA polymerase activityInterproscan
GO:0006281Biological ProcessDNA repairInterproscan
GO:0034061Molecular FunctionDNA polymerase activityInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006303Biological Processdouble-strand break repair via nonhomologous end joiningInterproscan

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