Detailed information of evm.model.ptg000027l.416 in Aurelia coerulea

Genomic Location: chr1:38903564...38936843
NR annotation: XP_031561705.1, histidine--tRNA ligase, cytoplasmic-like isoform X1 [Actinia tenebrosa]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q2KI84Histidine--tRNA ligase, cytoplasmic OS=Bos taurus OX=9913 GN=HARS1 PE=2 SV=1
Q61035Histidine--tRNA ligase, cytoplasmic OS=Mus musculus OX=10090 GN=Hars1 PE=1 SV=2
P12081Histidine--tRNA ligase, cytoplasmic OS=Homo sapiens OX=9606 GN=HARS1 PE=1 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF03129HGTP_anticodonAnticodon binding domainDomainInterproscan
PF13393tRNA-synt_HisHistidyl-tRNA synthetaseDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR015807FamilyHistidine-tRNA ligaseInterproscan
IPR045864Homologous_superfamilyClass II Aminoacyl-tRNA synthetase/Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL)Interproscan
IPR004154DomainAnticodon-bindingInterproscan
IPR041715DomainClass II Histidinyl-tRNA synthetase (HisRS)-like catalytic core domainInterproscan
IPR006195DomainAminoacyl-tRNA synthetase, class IIInterproscan
IPR000738DomainWHEP-TRS domainInterproscan
IPR036621Homologous_superfamilyAnticodon-binding domain superfamilyInterproscan
IPR009068Homologous_superfamilyuS15/NS1, RNA-binding domain superfamilyInterproscan
IPR033656DomainHistidyl-anticodon-bindingInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11476HISTIDYL-TRNA SYNTHETASEInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0004821Molecular Functionhistidine-tRNA ligase activityInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0006427Biological Processhistidyl-tRNA aminoacylationInterproscan
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0005739Cellular ComponentmitochondrionInterproscan
GO:0005829Cellular ComponentcytosolInterproscan
GO:0032543Biological Processmitochondrial translationInterproscan
GO:0004812Molecular Functionaminoacyl-tRNA ligase activityInterproscan
GO:0006418Biological ProcesstRNA aminoacylation for protein translationInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K01892HARS, hisS; histidyl-tRNA synthetaseEC:6.1.1.21
Transfer RNA biogenesisko03016deepkoala

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