Gene detail

Detailed information of evm.model.ptg000028l.1069 in Aurelia coerulea

Genomic Location: chr21:16586199...16587392
NR annotation: APW77285.1, SoxF1 [Hydractinia echinata]

Gene Structure

Sequence

Uniprot

Gene family

Uniprot term	Description
P40657	Putative transcription factor SOX-15 OS=Drosophila melanogaster OX=7227 GN=Sox15 PE=2 SV=2
Q8AWH2	Transcription factor Sox-17-beta.1 OS=Xenopus tropicalis OX=8364 GN=sox17b.1 PE=2 SV=1
Q6F2F0	Transcription factor Sox-17-beta.3 OS=Xenopus tropicalis OX=8364 GN=sox17b.3 PE=3 SV=2

Gene family	Subfamily
Transcription Factors Family	HMG

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00505	HMG_box	HMG (high mobility group) box	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036910	Homologous_superfamily	High mobility group box domain superfamily	Interproscan
IPR050140	Family	SRY-related HMG-box transcription factors	Interproscan
IPR009071	Domain	High mobility group box domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10270	SOX TRANSCRIPTION FACTOR	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0000978	Molecular Function	RNA polymerase II cis-regulatory region sequence-specific DNA binding	Interproscan
GO:0000981	Molecular Function	DNA-binding transcription factor activity, RNA polymerase II-specific	Interproscan
GO:0006355	Biological Process	regulation of DNA-templated transcription	Interproscan
GO:0009653	Biological Process	anatomical structure morphogenesis	Interproscan
GO:0030154	Biological Process	cell differentiation	Interproscan