Genomic Location: chr21:2667984...2670227
NR annotation: PIK47582.1, hypothetical protein BSL78_15536 [Apostichopus japonicus]
| CDS | ||||
| evm.model.ptg000028l.202 | ||||
| Transcript |
| evm.model.ptg000028l.202 |
| Protein |
| evm.model.ptg000028l.202 |
| Gene family | Subfamily |
|---|---|
| Transcription Factors Family | HTH |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF05225 | HTH_psq | helix-turn-helix, Psq domain | Domain | Interproscan |
| PF03184 | DDE_1 | DDE superfamily endonuclease | Family | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR006600 | Domain | HTH CenpB-type DNA-binding domain | Interproscan |
| IPR036397 | Homologous_superfamily | Ribonuclease H superfamily | Interproscan |
| IPR007889 | Domain | DNA binding HTH domain, Psq-type | Interproscan |
| IPR009057 | Homologous_superfamily | Homeobox-like domain superfamily | Interproscan |
| IPR050863 | Family | Centromere and Transposable Element-Derived Protein | Interproscan |
| IPR004875 | Domain | DDE superfamily endonuclease domain | Interproscan |
| IPR011011 | Homologous_superfamily | Zinc finger, FYVE/PHD-type | Interproscan |
| IPR013083 | Homologous_superfamily | Zinc finger, RING/FYVE/PHD-type | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR19303 | TRANSPOSON | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0003676 | Molecular Function | nucleic acid binding | Interproscan |
| GO:0003677 | Molecular Function | DNA binding | Interproscan |
| GO:0005634 | Cellular Component | nucleus | Interproscan |
Maintained by Dr. Jiajie She from Prof. Longjun Wu's Lab & Prof. Pei-yuan Qian's Lab
Hong Kong Branch of the Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou)
Hong Kong University of Science and Technology
Clear Water Bay, Kowloon, Hong Kong
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