Gene detail

Detailed information of evm.model.ptg000028l.870 in Aurelia coerulea

Genomic Location: chr21:11884349...11885269
NR annotation: VDI51442.1, Hypothetical predicted protein [Mytilus galloprovincialis]

Gene Structure

Sequence

Gene family

Gene family	Subfamily
Transcription Factors Family	HTH
Ubiquitin Family	E3\|E3 activity RING\|PHD

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00628	PHD	PHD-finger	Domain	Interproscan
PF05225	HTH_psq	helix-turn-helix, Psq domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR007889	Domain	DNA binding HTH domain, Psq-type	Interproscan
IPR019786	Conserved_site	Zinc finger, PHD-type, conserved site	Interproscan
IPR019787	Domain	Zinc finger, PHD-finger	Interproscan
IPR006600	Domain	HTH CenpB-type DNA-binding domain	Interproscan
IPR011011	Homologous_superfamily	Zinc finger, FYVE/PHD-type	Interproscan
IPR013083	Homologous_superfamily	Zinc finger, RING/FYVE/PHD-type	Interproscan
IPR009057	Homologous_superfamily	Homeobox-like domain superfamily	Interproscan
IPR001965	Domain	Zinc finger, PHD-type	Interproscan

PANTHER

PANTHER term	Description	Source
-	-	-

Gene Ontology

GO terms	Category	Description	Source
GO:0003677	Molecular Function	DNA binding	Interproscan