Detailed information of evm.model.ptg000028l.950 in Aurelia coerulea

Genomic Location: chr21:13767257...13776876
NR annotation: XP_020613730.1, non-structural maintenance of chromosomes element 1 homolog [Orbicella faveolata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q6PAF4Non-structural maintenance of chromosomes element 1 homolog OS=Xenopus laevis OX=8355 GN=nsmce1 PE=1 SV=1
Q499U6Non-structural maintenance of chromosomes element 1 homolog OS=Rattus norvegicus OX=10116 GN=Nsmce1 PE=2 SV=2
Q3T0X7Non-structural maintenance of chromosomes element 1 homolog OS=Bos taurus OX=9913 GN=NSMCE1 PE=2 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF08746zf-RING-likeRING-like domainDomainInterproscan
PF07574SMC_Nse1Nse1 non-SMC component of SMC5-6 complexFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR014857DomainNon-structural maintenance of chromosomes element 1, RING C4HC3-typeInterproscan
IPR011513FamilyNon-structural maintenance of chromosomes element 1Interproscan
IPR013083Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR036388Homologous_superfamilyWinged helix-like DNA-binding domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR20973NON-SMC ELEMENT 1-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0000724Biological Processdouble-strand break repair via homologous recombinationInterproscan
GO:0004842Molecular Functionubiquitin-protein transferase activityInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006281Biological ProcessDNA repairInterproscan
GO:0030915Cellular ComponentSmc5-Smc6 complexInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K22817NSMCE1, NSE1; non-structural maintenance of chromosomes element 1EC:2.3.2.27
DNA repair and recombination proteinsko03400deepkoala

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