Detailed information of evm.model.ptg000030l.21 in Aurelia coerulea

Genomic Location: chr17:4265640...4279897
NR annotation: XP_032227916.2, protein cycle [Nematostella vectensis]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
Q8QGQ7Basic helix-loop-helix ARNT-like protein 2 OS=Gallus gallus OX=9031 GN=BMAL2 PE=1 SV=1
O61734Protein cycle OS=Drosophila melanogaster OX=7227 GN=cyc PE=1 SV=2
Q9DG12Aryl hydrocarbon receptor nuclear translocator 2 OS=Danio rerio OX=7955 GN=arnt2 PE=1 SV=2
Gene familySubfamily
Transcription Factors FamilybHLH

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF14598PAS_11PAS domainDomainInterproscan
PF00010HLHHelix-loop-helix DNA-binding domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000014DomainPAS domainInterproscan
IPR035965Homologous_superfamilyPAS domain superfamilyInterproscan
IPR011598DomainMyc-type, basic helix-loop-helix (bHLH) domainInterproscan
IPR001067FamilyNuclear translocatorInterproscan
IPR050933FamilyCircadian Clock Transcription FactorsInterproscan
IPR036638Homologous_superfamilyHelix-loop-helix DNA-binding domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR23042CIRCADIAN PROTEIN CLOCK/ARNT/BMAL/PASInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0046983Molecular Functionprotein dimerization activityInterproscan
GO:0003700Molecular FunctionDNA-binding transcription factor activityInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0005667Cellular Componenttranscription regulator complexInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0006355Biological Processregulation of DNA-templated transcriptionInterproscan
GO:0000978Molecular FunctionRNA polymerase II cis-regulatory region sequence-specific DNA bindingInterproscan
GO:0000981Molecular FunctionDNA-binding transcription factor activity, RNA polymerase II-specificInterproscan
GO:0006357Biological Processregulation of transcription by RNA polymerase IIInterproscan
GO:0034751Cellular Componentaryl hydrocarbon receptor complexInterproscan

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