Detailed information of evm.model.ptg000031l.18 in Aurelia coerulea

Genomic Location: chr11:10680967...10695582
NR annotation: CAH3116907.1, unnamed protein product [Pocillopora meandrina]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
P36406E3 ubiquitin-protein ligase TRIM23 OS=Homo sapiens OX=9606 GN=TRIM23 PE=1 SV=1
Q8BGX0E3 ubiquitin-protein ligase TRIM23 OS=Mus musculus OX=10090 GN=Trim23 PE=2 SV=1
P36407E3 ubiquitin-protein ligase TRIM23 OS=Rattus norvegicus OX=10116 GN=Trim23 PE=2 SV=2
Gene familySubfamily
Ubiquitin FamilyE3|E3 activity RING|RING

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00643zf-B_boxB-box zinc fingerDomainInterproscan
PF00025ArfADP-ribosylation factor familyDomainInterproscan
PF14634zf-RING_5zinc-RING finger domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR017907Conserved_siteZinc finger, RING-type, conserved siteInterproscan
IPR000315DomainB-box-type zinc fingerInterproscan
IPR005225DomainSmall GTP-binding protein domainInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR003649DomainB-box, C-terminalInterproscan
IPR006689FamilySmall GTPase superfamily, ARF/SAR typeInterproscan
IPR024156FamilySmall GTPase superfamily, ARF typeInterproscan
IPR013083Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR001841DomainZinc finger, RING-typeInterproscan
IPR013087DomainZinc finger C2H2-typeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11711ADP RIBOSYLATION FACTOR-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0008270Molecular Functionzinc ion bindingInterproscan
GO:0005525Molecular FunctionGTP bindingInterproscan
GO:0003924Molecular FunctionGTPase activityInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0005765Cellular Componentlysosomal membraneInterproscan
GO:0005886Cellular Componentplasma membraneInterproscan
GO:0006886Biological Processintracellular protein transportInterproscan
GO:0016192Biological Processvesicle-mediated transportInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K07963TRIM23, ARFD1; tripartite motif-containing protein 23EC:2.3.2.27
GTP-binding proteinsko04031deepkoala

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