Detailed information of evm.model.ptg000031l.223 in Aurelia coerulea

Genomic Location: chr11:6486674...6579921
NR annotation: XP_047123283.1, cellular tumor antigen p53 isoform X2 [Hydra vulgaris]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
Q9W678Cellular tumor antigen p53 OS=Barbus barbus OX=40830 GN=tp53 PE=2 SV=1
O57538Cellular tumor antigen p53 OS=Xiphophorus hellerii OX=8084 GN=tp53 PE=2 SV=1
Q92143Cellular tumor antigen p53 OS=Xiphophorus maculatus OX=8083 GN=tp53 PE=2 SV=2
Gene familySubfamily
Transcription Factors FamilyP53

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF15392JoubertJoubert syndrome-associatedFamilyInterproscan
PF00870P53P53 DNA-binding domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR028236FamilyCiliogenesis and planar polarity effector 1Interproscan
IPR011615Domainp53, DNA-binding domainInterproscan
IPR002117Familyp53 tumour suppressor familyInterproscan
IPR008967Homologous_superfamilyp53-like transcription factor, DNA-binding domain superfamilyInterproscan
IPR012346Homologous_superfamilyp53/RUNT-type transcription factor, DNA-binding domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11447CELLULAR TUMOR ANTIGEN P53Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0000976Molecular Functiontranscription cis-regulatory region bindingInterproscan
GO:0000978Molecular FunctionRNA polymerase II cis-regulatory region sequence-specific DNA bindingInterproscan
GO:0000981Molecular FunctionDNA-binding transcription factor activity, RNA polymerase II-specificInterproscan
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0003700Molecular FunctionDNA-binding transcription factor activityInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006355Biological Processregulation of DNA-templated transcriptionInterproscan
GO:0006357Biological Processregulation of transcription by RNA polymerase IIInterproscan
GO:0006915Biological Processapoptotic processInterproscan

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