Detailed information of evm.model.ptg000031l.247 in Aurelia coerulea

Genomic Location: chr11:5970424...5981283
NR annotation: AAQ75377.1, transcription factor Atl1 [Podocoryna carnea]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
Q9Y0A7Basic helix-loop-helix transcription factor amos OS=Drosophila melanogaster OX=7227 GN=amos PE=1 SV=2
Q9VGJ5Protein Fer3 OS=Drosophila melanogaster OX=7227 GN=fer3 PE=2 SV=2
O57598Transcription factor ATOH7 OS=Gallus gallus OX=9031 GN=ATOH7 PE=1 SV=2
Gene familySubfamily
Transcription Factors FamilybHLH

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00010HLHHelix-loop-helix DNA-binding domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036638Homologous_superfamilyHelix-loop-helix DNA-binding domain superfamilyInterproscan
IPR011598DomainMyc-type, basic helix-loop-helix (bHLH) domainInterproscan
IPR050283FamilyE-box Binding Transcriptional RegulatorsInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR23349BASIC HELIX-LOOP-HELIX TRANSCRIPTION FACTOR, TWISTInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0046983Molecular Functionprotein dimerization activityInterproscan
GO:0000977Molecular FunctionRNA polymerase II transcription regulatory region sequence-specific DNA bindingInterproscan
GO:0000981Molecular FunctionDNA-binding transcription factor activity, RNA polymerase II-specificInterproscan
GO:0006357Biological Processregulation of transcription by RNA polymerase IIInterproscan
GO:0032502Biological Processdevelopmental processInterproscan

TOP