Genomic Location: chr15:20234568...20320773
NR annotation: XP_047132382.1, neogenin [Hydra vulgaris]
| CDS | ||||
| evm.model.ptg000037l.106 | ||||
| Transcript |
| evm.model.ptg000037l.106 |
| Protein |
| evm.model.ptg000037l.106 |
| Uniprot term | Description |
|---|---|
| P28289 | Tropomodulin-1 OS=Homo sapiens OX=9606 GN=TMOD1 PE=1 SV=1 |
| A0JNC0 | Tropomodulin-1 OS=Bos taurus OX=9913 GN=TMOD1 PE=2 SV=1 |
| P49813 | Tropomodulin-1 OS=Mus musculus OX=10090 GN=Tmod1 PE=1 SV=2 |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF13927 | Ig_3 | Immunoglobulin domain | Domain | Interproscan |
| PF07679 | I-set | Immunoglobulin I-set domain | Domain | Interproscan |
| PF00041 | fn3 | Fibronectin type III domain | Domain | Interproscan |
| PF00035 | dsrm | Double-stranded RNA binding motif | Domain | Interproscan |
| PF03250 | Tropomodulin | Tropomodulin | Family | Interproscan |
| PF06583 | Neogenin_C | Neogenin C-terminus | Family | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR013783 | Homologous_superfamily | Immunoglobulin-like fold | Interproscan |
| IPR003961 | Domain | Fibronectin type III | Interproscan |
| IPR036116 | Homologous_superfamily | Fibronectin type III superfamily | Interproscan |
| IPR036179 | Homologous_superfamily | Immunoglobulin-like domain superfamily | Interproscan |
| IPR014720 | Domain | Double-stranded RNA-binding domain | Interproscan |
| IPR013098 | Domain | Immunoglobulin I-set | Interproscan |
| IPR007110 | Domain | Immunoglobulin-like domain | Interproscan |
| IPR003599 | Domain | Immunoglobulin subtype | Interproscan |
| IPR003598 | Domain | Immunoglobulin subtype 2 | Interproscan |
| IPR032675 | Homologous_superfamily | Leucine-rich repeat domain superfamily | Interproscan |
| IPR004934 | Family | Tropomodulin | Interproscan |
| IPR010560 | Domain | Neogenin, C-terminal | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR44170 | PROTEIN SIDEKICK | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0005515 | Molecular Function | protein binding | Interproscan |
| GO:0005523 | Molecular Function | tropomyosin binding | Interproscan |
| GO:0051694 | Biological Process | pointed-end actin filament capping | Interproscan |
| GO:0098609 | Biological Process | cell-cell adhesion | Interproscan |
| GO:0016020 | Cellular Component | membrane | Interproscan |
Maintained by Dr. Jiajie She from Prof. Longjun Wu's Lab & Prof. Pei-yuan Qian's Lab
Hong Kong Branch of the Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou)
Hong Kong University of Science and Technology
Clear Water Bay, Kowloon, Hong Kong
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