Detailed information of evm.model.ptg000055l.237 in Aurelia coerulea

Genomic Location: chr1:46612429...46628540
NR annotation: XP_047144519.1, double-stranded RNA-specific editase Adar [Hydra vulgaris]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q9NII1Double-stranded RNA-specific editase Adar OS=Drosophila melanogaster OX=7227 GN=Adar PE=1 SV=2
Q91ZS8Double-stranded RNA-specific editase 1 OS=Mus musculus OX=10090 GN=Adarb1 PE=1 SV=1
P51400Double-stranded RNA-specific editase 1 OS=Rattus norvegicus OX=10116 GN=Adarb1 PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00035dsrmDouble-stranded RNA binding motifDomainInterproscan
PF02137A_deaminAdenosine-deaminase (editase) domainFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR014720DomainDouble-stranded RNA-binding domainInterproscan
IPR002466DomainAdenosine deaminase/editaseInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10910EUKARYOTE SPECIFIC DSRNA BINDING PROTEINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003725Molecular Functiondouble-stranded RNA bindingInterproscan
GO:0003726Molecular Functiondouble-stranded RNA adenosine deaminase activityInterproscan
GO:0005730Cellular ComponentnucleolusInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0006382Biological Processadenosine to inosine editingInterproscan
GO:0006396Biological ProcessRNA processingInterproscan
GO:0008251Molecular FunctiontRNA-specific adenosine deaminase activityInterproscan
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0004000Molecular Functionadenosine deaminase activityInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K13194ADARB; double stranded RNA-specific editase BEC:3.5.-.-
Spliceosomeko03041deepkoala

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