Detailed information of evm.model.ptg000055l.252 in Aurelia coerulea

Genomic Location: chr1:47206147...47238177
NR annotation: CEG06165.1, GATA zinc-finger transcription factor [Clytia hemisphaerica]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P91623GATA-binding factor C OS=Drosophila melanogaster OX=7227 GN=grn PE=2 SV=1
P15976Erythroid transcription factor OS=Homo sapiens OX=9606 GN=GATA1 PE=1 SV=1
P43429Erythroid transcription factor OS=Rattus norvegicus OX=10116 GN=Gata1 PE=2 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00320GATAGATA zinc fingerDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000679DomainZinc finger, GATA-typeInterproscan
IPR039355FamilyTranscription factor GATAInterproscan
IPR013088Homologous_superfamilyZinc finger, NHR/GATA-typeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10071TRANSCRIPTION FACTOR GATA FAMILY MEMBERInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0006355Biological Processregulation of DNA-templated transcriptionInterproscan
GO:0043565Molecular Functionsequence-specific DNA bindingInterproscan
GO:0000122Biological Processnegative regulation of transcription by RNA polymerase IIInterproscan
GO:0000978Molecular FunctionRNA polymerase II cis-regulatory region sequence-specific DNA bindingInterproscan
GO:0000981Molecular FunctionDNA-binding transcription factor activity, RNA polymerase II-specificInterproscan
GO:0003700Molecular FunctionDNA-binding transcription factor activityInterproscan
GO:0006357Biological Processregulation of transcription by RNA polymerase IIInterproscan
GO:0045944Biological Processpositive regulation of transcription by RNA polymerase IIInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan

TOP