Detailed information of evm.model.ptg000055l.269 in Aurelia coerulea

Genomic Location: chr1:47913969...47933877
NR annotation: ACM62725.1, Cdx caudal homeodomain protein [Clytia hemisphaerica]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
Q9H4S2GS homeobox 1 OS=Homo sapiens OX=9606 GN=GSX1 PE=1 SV=1
P81192Homeobox protein Hox-A4 (Fragment) OS=Lineus sanguineus OX=187800 GN=HOXA4 PE=3 SV=1
P14839Homeobox protein Hox-B6 (Fragment) OS=Gallus gallus OX=9031 GN=HOXB6 PE=3 SV=1
Gene familySubfamily
Transcription Factors FamilyHomeobox

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00046HomeodomainHomeodomainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001356DomainHomeobox domainInterproscan
IPR017970Conserved_siteHomeobox, conserved siteInterproscan
IPR009057Homologous_superfamilyHomeobox-like domain superfamilyInterproscan
IPR020479DomainHomeobox domain, metazoaInterproscan
IPR050877FamilyEMX/VAX/Noto Homeobox Transcription FactorsInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24339HOMEOBOX PROTEIN EMX-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0000981Molecular FunctionDNA-binding transcription factor activity, RNA polymerase II-specificInterproscan
GO:0006355Biological Processregulation of DNA-templated transcriptionInterproscan
GO:0000978Molecular FunctionRNA polymerase II cis-regulatory region sequence-specific DNA bindingInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006357Biological Processregulation of transcription by RNA polymerase IIInterproscan
GO:0007417Biological Processcentral nervous system developmentInterproscan
GO:0030182Biological Processneuron differentiationInterproscan

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