Detailed information of evm.model.ptg000055l.272 in Aurelia coerulea

Genomic Location: chr1:48051212...48072146
NR annotation: CAR62457.1, putative Pdx/Xlox homeodomain transcription factor, partial [Turritopsis dohrnii]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
P17138Homeobox protein HTR-A2 (Fragment) OS=Helobdella triserialis OX=6413 PE=3 SV=1
P15860Homeobox protein H90 (Fragment) OS=Apis mellifera OX=7460 PE=3 SV=1
P14837Pancreas/duodenum homeobox protein 1 OS=Xenopus laevis OX=8355 GN=pdx1 PE=2 SV=2
Gene familySubfamily
Transcription Factors FamilyHomeobox

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00046HomeodomainHomeodomainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR020479DomainHomeobox domain, metazoaInterproscan
IPR001356DomainHomeobox domainInterproscan
IPR009057Homologous_superfamilyHomeobox-like domain superfamilyInterproscan
IPR017970Conserved_siteHomeobox, conserved siteInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR45664PROTEIN ZERKNUELLT 1-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0000978Molecular FunctionRNA polymerase II cis-regulatory region sequence-specific DNA bindingInterproscan
GO:0000981Molecular FunctionDNA-binding transcription factor activity, RNA polymerase II-specificInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006357Biological Processregulation of transcription by RNA polymerase IIInterproscan
GO:0009952Biological Processanterior/posterior pattern specificationInterproscan
GO:0048704Biological Processembryonic skeletal system morphogenesisInterproscan
GO:0006355Biological Processregulation of DNA-templated transcriptionInterproscan

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