Detailed information of evm.model.ptg000055l.301 in Aurelia coerulea

Genomic Location: chr1:48697249...48714022
NR annotation: XP_022798258.1, protein dachsous-like [Stylophora pistillata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q2PZL6Protocadherin Fat 4 OS=Mus musculus OX=10090 GN=Fat4 PE=1 SV=2
D4ACX8Protocadherin-16 OS=Rattus norvegicus OX=10116 GN=Dchs1 PE=3 SV=2
Q6V0I7Protocadherin Fat 4 OS=Homo sapiens OX=9606 GN=FAT4 PE=1 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01049CADH_Y-type_LIRCadherin, Y-type LIR-motifFamilyInterproscan
PF00028CadherinCadherin domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR002126DomainCadherin-likeInterproscan
IPR020894Conserved_siteCadherin conserved siteInterproscan
IPR000233DomainCadherin, Y-type LIR-motifInterproscan
IPR015919Homologous_superfamilyCadherin-like superfamilyInterproscan
IPR050174FamilyProtocadherin/Cadherin-related Cell AdhesionInterproscan
IPR027397Homologous_superfamilyCatenin binding domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24028CADHERIN-87AInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005509Molecular Functioncalcium ion bindingInterproscan
GO:0007156Biological Processhomophilic cell adhesion via plasma membrane adhesion moleculesInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0005886Cellular Componentplasma membraneInterproscan
GO:0007155Biological Processcell adhesionInterproscan
GO:0005887Cellular Componentplasma membraneInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K16507DCHS1_2, PCDH16_23; protocadherin-16/23-Cell adhesion moleculesko04515deepkoala

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