Gene detail

Detailed information of evm.model.scaffold_16658.7 in Platygyra sinensis

Genomic Location: scaffold_16658:38128...50757
NR annotation: no NCBI-NR hit recorded
Species abbreviation PSINE2 · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13353 all species →	Fer4_12	4Fe-4S single cluster domain	Domain	Interproscan
PF06463 all species →	Mob_synth_C	Molybdenum Cofactor Synthesis C	Domain	Interproscan
PF04055 all species →	Radical_SAM	Radical SAM superfamily	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR013483 all species →	Family	Molybdenum cofactor biosynthesis protein A	Interproscan
IPR000385 all species →	Conserved_site	MoaA/NifB/PqqE, iron-sulphur binding, conserved site	Interproscan
IPR050105 all species →	Family	Molybdenum cofactor biosynthesis MoaA/MoaC	Interproscan
IPR010505 all species →	Domain	Molybdenum cofactor biosynthesis protein A-like, twitch domain	Interproscan
IPR007197 all species →	Domain	Radical SAM	Interproscan
IPR006638 all species →	Domain	Elp3/MiaA/NifB-like, radical SAM core domain	Interproscan
IPR013785 all species →	Homologous_superfamily	Aldolase-type TIM barrel	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR22960 all species →	MOLYBDOPTERIN COFACTOR SYNTHESIS PROTEIN A	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0006777 all species →	Biological Process	Mo-molybdopterin cofactor biosynthetic process	Interproscan
GO:0046872 all species →	Molecular Function	metal ion binding	Interproscan
GO:0003824 all species →	Molecular Function	catalytic activity	Interproscan
GO:0051539 all species →	Molecular Function	4 iron, 4 sulfur cluster binding	Interproscan
GO:0061798 all species →	Molecular Function	GTP 3',8'-cyclase activity	Interproscan
GO:0061799 all species →	Molecular Function	cyclic pyranopterin monophosphate synthase activity	Interproscan
GO:0019008 all species →	Cellular Component	obsolete molybdopterin synthase complex	Interproscan
GO:0051536 all species →	Molecular Function	iron-sulfur cluster binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K20967	MOCS1; GTP 3',8-cyclase / cyclic pyranopterin monophosphate synthase	EC:4.1.99.22 EC:4.6.1.17	Folate biosynthesis	ko00790	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.