Gene detail

Detailed information of evm.model.scaffold_17448.12 in Platygyra sinensis

Genomic Location: scaffold_17448:150977...156652
NR annotation: no NCBI-NR hit recorded
Species Platygyra sinensis · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00249 all species →	Myb_DNA-binding	Myb-like DNA-binding domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR017884 all species →	Domain	SANT domain	Interproscan
IPR009057 all species →	Homologous_superfamily	Homeobox-like domain superfamily	Interproscan
IPR051571 all species →	Family	Nuclear receptor corepressor	Interproscan
IPR001005 all species →	Domain	SANT/Myb domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR13992 all species →	NUCLEAR RECEPTOR CO-REPRESSOR RELATED NCOR	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0000790 all species →	Cellular Component	chromatin	Interproscan
GO:0006357 all species →	Biological Process	regulation of transcription by RNA polymerase II	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for evm.model.scaffold_17448.12.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.