Detailed information of evm.model.scaffold_20387.3 in Platygyra sinensis

Genomic Location: scaffold_20387:7190...14616
NR annotation: no NCBI-NR hit recorded
Species Platygyra sinensis · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF10354
all species →		BMT5-likerRNA (uridine-N3-)-methyltransferase BTM5-likeDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036690
all species →		Homologous_superfamilyFerrodoxin-fold anticodon-binding domain superfamilyInterproscan
IPR045864
all species →		Homologous_superfamilyClass II Aminoacyl-tRNA synthetase/Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL)Interproscan
IPR019446
all species →		Domain25S rRNA (uridine-N(3))-methyltransferase BMT5-likeInterproscan
IPR029063
all species →		Homologous_superfamilyS-adenosyl-L-methionine-dependent methyltransferase superfamilyInterproscan
IPR005121
all species →		DomainFerrodoxin-fold anticodon-binding domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11538
all species →		PHENYLALANYL-TRNA SYNTHETASEInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0070042
all species →		Molecular FunctionrRNA (uridine-N3-)-methyltransferase activityInterproscan
GO:0070475
all species →		Biological ProcessrRNA base methylationInterproscan
GO:0005737
all species →		Cellular ComponentcytoplasmInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.scaffold_20387.3.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP