Detailed information of evm.model.scaffold_21560.1 in Platygyra sinensis

Genomic Location: scaffold_21560:2440...15771
NR annotation: no NCBI-NR hit recorded
Species Platygyra sinensis · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF09333
all species →		ATG2-VPS13_CATG2/VPS13, C terminal domainDomainInterproscan
PF16909
all species →		VPS13_DH-likeVacuolar-sorting-associated 13 protein, DH-like domainFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR026847
all species →		FamilyVacuolar protein sorting-associated protein 13Interproscan
IPR015412
all species →		DomainAtg2/VPS13, C-terminalInterproscan
IPR031645
all species →		DomainVacuolar protein sorting-associated protein 13, DH-like domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR16166
all species →		VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN VPS13Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0006623
all species →		Biological Processprotein targeting to vacuoleInterproscan
GO:0019898
all species →		Cellular Componentextrinsic component of membraneInterproscan
GO:0045053
all species →		Biological Processprotein retention in Golgi apparatusInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.scaffold_21560.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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