Detailed information of evm.model.scaffold_22294.1 in Platygyra sinensis

Genomic Location: scaffold_22294:2120...15301
NR annotation: no NCBI-NR hit recorded
Species Platygyra sinensis · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 Gene family
Family typeMembership / link
Ubiquitin familyE3|E3 activity RING|PHD · all ubiquitin genes in this species

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF08073
all species →		CHDNTCHDNT (NUC034) domainDomainInterproscan
PF00628
all species →		PHDPHD-fingerDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR011011
all species →		Homologous_superfamilyZinc finger, FYVE/PHD-typeInterproscan
IPR019787
all species →		DomainZinc finger, PHD-fingerInterproscan
IPR012958
all species →		DomainCHD, N-terminalInterproscan
IPR013083
all species →		Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR000953
all species →		DomainChromo/chromo shadow domainInterproscan
IPR001965
all species →		DomainZinc finger, PHD-typeInterproscan
IPR016197
all species →		Homologous_superfamilyChromo-like domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24102
all species →		PHD FINGER PROTEINInterproscan

 Gene Ontology
No Gene Ontology signature was detected for evm.model.scaffold_22294.1. This gene does have a gene model — the search simply returned no hit.
Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.scaffold_22294.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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