Gene detail

Detailed information of evm.model.scaffold_41874.2 in Platygyra sinensis

Genomic Location: scaffold_41874:20130...24952
NR annotation: no NCBI-NR hit recorded
Species Platygyra sinensis · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF07647 all species →	SAM_2	SAM domain (Sterile alpha motif)	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR013761 all species →	Homologous_superfamily	Sterile alpha motif/pointed domain superfamily	Interproscan
IPR043446 all species →	Family	Neurabin-like family	Interproscan
IPR001660 all species →	Domain	Sterile alpha motif domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR16154 all species →	NEURABIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan
GO:0007015 all species →	Biological Process	actin filament organization	Interproscan
GO:0014069 all species →	Cellular Component	postsynaptic density	Interproscan
GO:0015629 all species →	Cellular Component	actin cytoskeleton	Interproscan
GO:0019722 all species →	Biological Process	calcium-mediated signaling	Interproscan
GO:0030425 all species →	Cellular Component	dendrite	Interproscan
GO:0031175 all species →	Biological Process	neuron projection development	Interproscan
GO:0051015 all species →	Molecular Function	actin filament binding	Interproscan
GO:0005515 all species →	Molecular Function	protein binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for evm.model.scaffold_41874.2.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.