Gene detail

Detailed information of evm.model.scaffold_45957.1 in Platygyra sinensis

Genomic Location: scaffold_45957:10735...19213
NR annotation: no NCBI-NR hit recorded
Species Platygyra sinensis · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF17790 all species →	MG1	Macroglobulin domain MG1	Domain	Interproscan
PF17789 all species →	MG4	Macroglobulin domain MG4	Domain	Interproscan
PF01835 all species →	MG2	MG2 domain	Domain	Interproscan
PF17791 all species →	MG3	Macroglobulin domain MG3	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR041425 all species →	Domain	Complement C3/4/5, macroglobulin domain MG1	Interproscan
IPR050473 all species →	Family	Alpha-2-macroglobulin/Complement system	Interproscan
IPR040839 all species →	Domain	Macroglobulin domain MG4	Interproscan
IPR013783 all species →	Homologous_superfamily	Immunoglobulin-like fold	Interproscan
IPR002890 all species →	Domain	Macroglobulin domain	Interproscan
IPR041555 all species →	Domain	Macroglobulin domain MG3	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11412 all species →	MACROGLOBULIN / COMPLEMENT	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0004866 all species →	Molecular Function	endopeptidase inhibitor activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for evm.model.scaffold_45957.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.