Detailed information of evm.model.scaffold_47886.1 in Platygyra sinensis

Genomic Location: scaffold_47886:142...6761
NR annotation: no NCBI-NR hit recorded
Species abbreviation PSINE2 · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF05127
all species →		Helicase_RecDHelicaseDomainInterproscan
PF08351
all species →		TmcA_NtRNA(Met) cytidine acetyltransferase TmcA, N-terminalFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR007807
all species →		DomainHelicase domainInterproscan
IPR027417
all species →		Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR032672
all species →		FamilyTmcA/NAT10/Kre33Interproscan
IPR013562
all species →		DomaintRNA(Met) cytidine acetyltransferase TmcA, N-terminalInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10925
all species →		N-ACETYLTRANSFERASE 10Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0000049
all species →		Molecular FunctiontRNA bindingInterproscan
GO:0005730
all species →		Cellular ComponentnucleolusInterproscan
GO:0008080
all species →		Molecular FunctionN-acetyltransferase activityInterproscan
GO:0030686
all species →		Cellular Component90S preribosomeInterproscan
GO:1904812
all species →		Biological ProcessrRNA acetylation involved in maturation of SSU-rRNAInterproscan
GO:1990883
all species →		Molecular FunctionrRNA cytidine N-acetyltransferase activityInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.scaffold_47886.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP