Gene detail

Detailed information of evm.model.scaffold_57928.1 in Platygyra sinensis

Genomic Location: scaffold_57928:1747...15029
NR annotation: no NCBI-NR hit recorded
Species Platygyra sinensis · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

evm.model.scaffold_57928.1

ATGGCTAAATGGGGCGAAGGTGATCCGAGGTGGATCGTAGAAGAGAGAGCTGACGCTAAAAATGTGAATAATTGGCACTGGACAGAGAAAAATGCAACTCCTTGGTCCAAGGAAAGGCTGAAGACACTATTAAAGGATTTAGAAATCGAAACAGATAAAGGAAAAGTGAAGATAACTGATGTTCGCAAAATTGATGGTGAAGCTTATGCCAACAACAGAAAAGCAAAATTGATATTTTTCTATGAATGGGTAATAACATTAGATTGGTCAGGGACCATGACAGATAGTGATAAAGTATGGAAAGGAAAGATTGAGATTCCAAATCTTAGTGAAGAACACGATGTAGAGGAAGTGAATGTGCTGGTGACAGTTGAAAAGACCTCAGACGAAAGTTATCAGTTGAAAGACATGGAATGGAAAGCTAGATACGAAGTGGATGAGGAAGAAAACGAAAAGCAGGAAAGAAAACTCAAGGACTGCTTTGGATGGTTTATAAGAGCGAAGTACGTGTTGCAGTTTTCGAGATGTGATGACCTCCAAAACACTGGCATCGATCCGACGATTGAAAGTCGTAGAATTGTTTGGACCTTTATTTTTGAAGCTGCTCGAAGGAAAGCGGAAGAATTCAGTCAAGGGATGATTCTCCCATCTAAAGACAGCCCAGTTCTCCAGAGATCCTCTTCTGAGGCACTCAAGGCTACAGTTGTCAACGCTCCTGCTGGCTCAGGAGATGGAAATAAAAACAAATCTGATACAGCTCAAGTAGGCTGTCCAATCTCCACAAAAAAGCTTACAATGACACAAGAGTTTCTTACTACGGCTGAAGAACTTTATGCAGCTTTAACAGAACAAGAGAGAATTGAAGCTTTCACTCAGAGCTCAGCAAAAGTGGATGCAAGTCGTGGAGGAACATTTGTCCTGTTTAACGGCAATGTTACAGGAAAATTCCAAGAATTGTCTCCGCTGAACACACAAGAGGCCATCCAGATCGTCAAATCCACCTGCAGACGTCTGGTCAAAGCGCGGATAAACGACTGTCACAGAAGACTCAACTACTGCAACAATAAACTACAACAACAACTTGACAAACTTAAACAACTGTTACCGACTAACTTACTTGACACTGTTATGACAATCGCCGGCAGGCGAGCCGACAAAACCACTGACCGCGTTCGTACTGAACAAGAACGAAAACTGACACGACTTCAACGCAATAAAGACAAAAAACGACCGAAAACTGACAAAAACTGGGTCAGGAATATTTCTTCCCGTCCCTTAGACAAAACCGAGACTCACGTACTGTCCTACGGACTAAAACACTCAGTGACGCCTAAACGAATACCGACCGAGTCTATTGTATCCAGTATTGAGGCGGTTCTGTCTCGCCAACGAGACATATCAGAATCTGCCAAGGATAACATCAGAAGCAGAATTGCTTCCACGGTACAATCAGCCTCTATACCTGACAATAACTTGACGAAAGACGAACAACAAGCACTGAAACGACTGAAAAACGACAACAACATTGTTATACTACCAGCCGACAAAGGACGTGTGACTGTTGTTATGGACAAAACTGACTATTTTGACAAAATGGACGCACTTGTTAACGACAAACAAACTTACGAAGAACTTAAACGCGACCCGACGCCAGCACTGCAACGTAAACTTAACAGCAAAATACTTACGCTTAAAAAGACTGACGCTATTGACACTCAACGCTACTATCGACTGAGGTGTTCTGTACCACAGCCACCTAAACTTTACGGACTACCTAAACTGCACAAACCTGGTATACCGATGCGACCTATAGTCTCATTCTGTGGGTCCCCTACGTATCAACTGTCTAAGTACTTGACGACCATACTGCAACCCTTAACTGACAAATCTAGACGAAAACTACAATCGACGGAGAACTTTATTGACGCTATTAAGACAGTACAGATACCTGACGACTACAAACTTGTGTCTTTTGATGTGAAATCACTGTTCACCAGTATTCCACTTCAATTGGCGTTACACTGCACCGAGACCGCTATACAACAATCCACCGTTAAACTACCGTTACCGACAGAAGACATTATGGACTTACTGAACCTCTGCCTTACATCGACTTACTTTCAGTACAACGGTAAACACTACAAACAGTTACATGGAACAGCCATGGGGTCGCCTGTTTCTGTTGTTGTCGCAGAAATTGTGATGCAACACGTGGAGGAACGCGCCCTTGCAACTTGCCGACAAACAATACCGCTCTGGTTACGCTACGTTGACGACACCTTTACCGCCGTTCACAAGGACGAAATTGACGCTTTTCACGACCACCTTAACGAACAGAACGCTGACATCCAGTTTACCAAAGAAATCGAAGAAAATGGAAAACTTCCTTTTCTAGACTGTTTGGTAAGCCGCGACAACAACGAACTACGAACGACAGTGTACAGAAAACCGACGCATACCGACAGATTACTTGACGAATCATCCTATAACCCGACTTCACACAAAGCCACGACTATAAAGACTTTAACGAGACGAGCGCAACTAGTTTGTGATACACCGGACAGCTTACGTGACGAGAACAAATACCTTGAACGTGTTTTTATTAAAAACAACTACAACGCTGACTTTATTAGACGAAACATTTACCGACCTACTGAAGCCGACGCAACGAACCAGAACCCGACACATGTTACTACAGTGACTATACCTTACATTAAGGGCACTTCTGAGACCATCTCACGGATCTTACAGCCCTACAACATCCGTGTAGCCCACAAACCTACAACCACGTTACGACACTTACTGACTAACGTTAAAGACCGAGACGAACCTAACAACAGACAGGGAGCAGTTTACAAGATCAAATGCTCTGACTGCGAGGCCTCCTACATTGGTGAGACTGGCAGAAACCTTAACACAAGACTGACTGAACACAAACGAGCGACGAGAAATGGTGATGTCAACAATCACATTGCTGTGCATCATCAACTGACAAACCACAACATTGACTGGGACTCTGCCCAATGCTTAACCTACAGTACTAACTATTTTCAACGACTGACTCTGGAAAGCTGGTACACTAACTTAGAACAAACACCTCTTAACAGATGTCAACAACTACCGGCGCCTTACAAACGACTTATCCGCGACGAAAACGAAACCGACAACCGGACTTCTAACAGACCGACTTAA

Transcript

evm.model.scaffold_57928.1

ATGGCTAAATGGGGCGAAGGTGATCCGAGGTGGATCGTAGAAGAGAGAGCTGACGCTAAAAATGTGAATAATTGGCACTGGACAGAGAAAAATGCAACTCCTTGGTCCAAGGAAAGGCTGAAGACACTATTAAAGGATTTAGAAATCGAAACAGATAAAGGAAAAGTGAAGATAACTGATGTTCGCAAAATTGATGGTGAAGCTTATGCCAACAACAGAAAAGCaaaattgatatttttctaTGAATGGGTAATAACATTAGATTGGTCAGgGACCATGACAGATAGTGATAAAGTATGGAAAGGAAAGATTGAGATTCCAAATCTTAGTGAAGAACACGATGTAGAGGAAGTGAATGTGCTGGTGACAGTTGAAAAGACCTCAGACGAAAGTTATCAGTTGAAAGACATGgaatggaaagctagatacgaagtggatgaggaagaaaacgaaaagcaggaaagaaaactcaaggactgctttggatggtttataagagcgaagtacgtgttgcagttttcgagatgtgatgacctccaaaacactggcatcgatccgaCGATTGAAagtcgtagaattgtttggacctttatttttgaagctgctcgaaggaaagcggaagAATTCAGTCAAGGGATGATTCTCCCATCTAAAGACAGCCCAGTTCTCCAGAGATCCTCTTCTGAGGCACTCAAGGCTACAGTTGTCAACGCTCCTGCTGGCTCAGGAgatggaaataaaaacaaatctGATACAGCTCAAGTAGGCTGTCCAATCTCCACAAAAAAGCTTACAATGACACAAGAGTTTCTTACTACGGCTGAAGAACTTTATGCAGCTTTAACAGAACAAGAGAGAATTGAAGCTTTCACTCAGAGCTCAGCAAAAGTGGATGCAAGTCGTGGAGGAACATTTGTCCTGTTTAACGGCAATGTTACAGGAAAATTCCAAGAATTGTCTCCGCTGAACACACAAGAGGCCATCCAGATCGTCAAATCCACCTGCAGACGTCTGGTCAAAGCGCGGATAAACGACTGTCACAGAAGACTCAACTACTGCAACAataaactacaacaacaacttgaCAAACTTAAACAACTGTTACCGACTAACTTACTTGACACTGTTATGACAATCGCCGGCAGGCGAGCCGACAAAACCACTGACCGCGTTCGTActgaacaagaacgaaaacTGACACGACTTCAAcgcaataaagacaaaaaacgaCCGAAAACTGACAAAAACTGGGTCAGGAATATTTCTTCCCGTCCCTTAGACAAAACCGAGACTCACGTACTGTCCTACGGACTAAAACACTCAGTGACGCCTAAACGAATACCGACCGAGTCTATTGTATCCAGTATTGAGGCGGTTCTGTCTCGCCAACGAGACATATCAGAATCTGCCAAGGATAACATCAGAAGCAGAATTGCTTCCACGGTACAATCAGCCTCTATACCTGACAATAACTTGACGAAAGACGAACAACAAGCACTGAAACGActgaaaaacgacaacaacattgtTATACTACCAGCCGACAAAGGACGTGTGACTGTTGTTATGGACAAAACtgactattttgacaaaatggacGCACTTGTTAACGACAAACAAACTTACGAAGAACTTAAACGCGACCCGACGCCAGCACTGCAACGTAAACTTAACAGCAAAATACTTACGCTTAAAAAGACTGACGCTATTGACACTCAACGCTACTATCGACTGAGGTGTTCTGTACCACAGCcacctaaactttacggactaccTAAACTGCACAAACCTGGTATACCGATGCGACCTATAGTCTCATTCTGTGGGTCCCCTACGTATCAACTGTCTAAGTACTTGACGACCATACTGCAACCCTTAACTGACAAATCTAGACGAAAACTACAATCGACGGAGAACTTTATTGACGCTATTAAGACAGTACAGATACCTGACGACtacaaacttgtgtcttttgatgtgaaatcactgttcaccagtattccacttcaattggcgttacactgcaccgagaccgctatacaacaatccaccgttaaactaccgttaccgacagaagacattatggacttactgaacctctgccttacatcgacttactttcagtacaacggtaaacactacaaacagttacatggaacagccatggggtcgcctgtttctgttgttgtcgcagaaattgtgatgcaacacgtggaggaacgcgcccttgcaacttgccgacaaacaataccgctctggttacgctacgttgacgacacctttaccgccgttcacaaggacgaaattgacgcttttcacgaccaccttaacgaacagaacgctgacatccagtttaccaaagaaatcgaagaaaatggaaaacttccttttctagactgtttggtaagccgcgacaacaacgaactacgaacgacagtgtacagaaaaccgacgcataccgacagattacttgacgaatcatcctataacccgacttcacacaaagccacgactataaagactttaacgagacgagcgcaactagtttgtgatacaccggacagcttacgtgacgagaacaaataccttgaacgtgtttttattaaaaacaactacaacgctgactttattagacgaaacatttaccgacctactgaagccgacgcaacgaaccagaacccgacacatgttactacagtgactataccttacattaagggcacttctgagaccatctcacggatcttacagccctacaacatccgtgtagcccacaaacctacaaccacgttacgacacttactgactaacgttaaagaccgagacgaacctaacaacagacagggagcagtttacaagatcaaatgctctgactgcgaggcctcctacattggtgagactggcagaaaccttaacacaagactgactgaacacaaacgagcgacgagaaatggtgatgtcaacaatcacattgctgtgcatcatcaactgacaaaccacaacattgactgggactctgcccaatgcttaacctacagtactaactattttcaacgactgactctggaaagctggtacactaacttagaacaaacacctcttaacagatgtcaacaactaccggcgccttacaaacgacttatccgcgacgaaaacgaaaccgacaaccggacttctaacagaccgacttaa

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF08327 all species →	AHSA1	Activator of Hsp90 ATPase homolog 1-like protein	Family	Interproscan
PF09229 all species →	Aha1_N	Activator of Hsp90 ATPase, N-terminal	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR013538 all species →	Domain	Activator of Hsp90 ATPase homologue 1-like, C-terminal	Interproscan
IPR043502 all species →	Homologous_superfamily	DNA/RNA polymerase superfamily	Interproscan
IPR000305 all species →	Domain	GIY-YIG endonuclease	Interproscan
IPR036338 all species →	Homologous_superfamily	Activator of Hsp90 ATPase, Aha1	Interproscan
IPR000477 all species →	Domain	Reverse transcriptase domain	Interproscan
IPR035901 all species →	Homologous_superfamily	GIY-YIG endonuclease superfamily	Interproscan
IPR023393 all species →	Homologous_superfamily	START-like domain superfamily	Interproscan
IPR015310 all species →	Domain	Activator of Hsp90 ATPase AHSA1-like, N-terminal	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR21301 all species →	REVERSE TRANSCRIPTASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0001671 all species →	Molecular Function	ATPase activator activity	Interproscan
GO:0051087 all species →	Molecular Function	protein-folding chaperone binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for evm.model.scaffold_57928.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.