Gene detail

Detailed information of evm.model.scaffold_87664.6 in Platygyra sinensis

Genomic Location: scaffold_87664:71197...80461
NR annotation: no NCBI-NR hit recorded
Species Platygyra sinensis · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00121 all species →	TIM	Triosephosphate isomerase	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000652 all species →	Family	Triosephosphate isomerase	Interproscan
IPR022896 all species →	Family	Triosephosphate isomerase, bacterial/eukaryotic	Interproscan
IPR013785 all species →	Homologous_superfamily	Aldolase-type TIM barrel	Interproscan
IPR035990 all species →	Homologous_superfamily	Triosephosphate isomerase superfamily	Interproscan
IPR020861 all species →	Active_site	Triosephosphate isomerase, active site	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR21139 all species →	TRIOSEPHOSPHATE ISOMERASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0004807 all species →	Molecular Function	triose-phosphate isomerase activity	Interproscan
GO:0006096 all species →	Biological Process	glycolytic process	Interproscan
GO:0005829 all species →	Cellular Component	cytosol	Interproscan
GO:0006094 all species →	Biological Process	gluconeogenesis	Interproscan
GO:0019563 all species →	Biological Process	glycerol catabolic process	Interproscan
GO:0046166 all species →	Biological Process	glyceraldehyde-3-phosphate biosynthetic process	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K01803	TPI, tpiA; triosephosphate isomerase (TIM)	EC:5.3.1.1	Exosome	ko04147	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.