Detailed information of g1.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: WP_169624077.1, formate--tetrahydrofolate ligase [Pacificispira spongiicola]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q1GE26Formate--tetrahydrofolate ligase OS=Ruegeria sp. (strain TM1040) OX=292414 GN=fhs PE=3 SV=1
Q5LNV0Formate--tetrahydrofolate ligase OS=Ruegeria pomeroyi (strain ATCC 700808 / DSM 15171 / DSS-3) OX=246200 GN=fhs1 PE=3 SV=1
Q28TR4Formate--tetrahydrofolate ligase OS=Jannaschia sp. (strain CCS1) OX=290400 GN=fhs PE=3 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF14664RICTOR_NRapamycin-insensitive companion of mTOR, N-termDomainInterproscan
PF14668RICTOR_VRapamycin-insensitive companion of mTOR, domain 5DomainInterproscan
PF14663RasGEF_N_2Rapamycin-insensitive companion of mTOR RasGEF_N domainDomainInterproscan
PF14666RICTOR_MRapamycin-insensitive companion of mTOR, middle domainDomainInterproscan
PF01423LSMLSM domain DomainInterproscan
PF00225KinesinKinesin motor domainDomainInterproscan
PF13927Ig_3Immunoglobulin domainDomainInterproscan
PF07679I-setImmunoglobulin I-set domainDomainInterproscan
PF08016PKD_channelPolycystin cation channelFamilyInterproscan
PF20519Polycystin_domPolycystin domainDomainInterproscan
PF01477PLATPLAT/LH2 domainDomainInterproscan
PF01268FTHFSFormate--tetrahydrofolate ligaseFamilyInterproscan
PF03747ADP_ribosyl_GHADP-ribosylglycohydrolaseFamilyInterproscan
PF09588YqaJYqaJ-like viral recombinase domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR028267DomainRapamycin-insensitive companion of mTOR, N-terminal domainInterproscan
IPR029452DomainRapamycin-insensitive companion of mTOR, domain 5Interproscan
IPR016024Homologous_superfamilyArmadillo-type foldInterproscan
IPR011989Homologous_superfamilyArmadillo-like helicalInterproscan
IPR028268FamilyPianissimo familyInterproscan
IPR029453DomainRapamycin-insensitive companion of mTOR, domain 4Interproscan
IPR029451DomainRapamycin-insensitive companion of mTOR, middle domainInterproscan
IPR027248FamilySmall nuclear ribonucleoprotein Sm D2Interproscan
IPR001163DomainSm domain, eukaryotic/archaea-typeInterproscan
IPR010920Homologous_superfamilyLSM domain superfamilyInterproscan
IPR047575DomainSm domainInterproscan
IPR019821Conserved_siteKinesin motor domain, conserved siteInterproscan
IPR001752DomainKinesin motor domainInterproscan
IPR036961Homologous_superfamilyKinesin motor domain superfamilyInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR027640FamilyKinesin-like proteinInterproscan
IPR013783Homologous_superfamilyImmunoglobulin-like foldInterproscan
IPR036179Homologous_superfamilyImmunoglobulin-like domain superfamilyInterproscan
IPR007110DomainImmunoglobulin-like domainInterproscan
IPR003599DomainImmunoglobulin subtypeInterproscan
IPR003961DomainFibronectin type IIIInterproscan
IPR036116Homologous_superfamilyFibronectin type III superfamilyInterproscan
IPR051170FamilyNeural and epithelial cell adhesion domain-containing proteinInterproscan
IPR003598DomainImmunoglobulin subtype 2Interproscan
IPR013098DomainImmunoglobulin I-setInterproscan
IPR023674Homologous_superfamilyRibosomal protein uL1-likeInterproscan
IPR013122DomainPolycystin cation channel, PKD1/PKD2Interproscan
IPR051223FamilyPolycystinInterproscan
IPR001024DomainPLAT/LH2 domainInterproscan
IPR036392Homologous_superfamilyPLAT/LH2 domain superfamilyInterproscan
IPR046791DomainPolycystin domainInterproscan
IPR003915FamilyPolycystic kidney disease type 2 proteinInterproscan
IPR000559FamilyFormate-tetrahydrofolate ligase, FTHFSInterproscan
IPR020628Conserved_siteFormate-tetrahydrofolate ligase, FTHFS, conserved siteInterproscan
IPR050792FamilyADP-ribosylglycohydrolaseInterproscan
IPR036705Homologous_superfamilyADP-ribosylation/Crystallin J1 superfamilyInterproscan
IPR005502FamilyADP-ribosylation/Crystallin J1Interproscan
IPR011335Homologous_superfamilyRestriction endonuclease type II-likeInterproscan
IPR051703FamilyNF-kappa-B Signaling RegulatorInterproscan
IPR011604Homologous_superfamilyPD-(D/E)XK endonuclease-like domain superfamilyInterproscan
IPR019080DomainYqaJ viral recombinaseInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR13298CYTOSOLIC REGULATOR PIANISSIMOInterproscan
PTHR12777SMALL NUCLEAR RIBONUCLEOPROTEIN SM D2Interproscan
PTHR47968CENTROMERE PROTEIN EInterproscan
PTHR12231CTX-RELATED TYPE I TRANSMEMBRANE PROTEINInterproscan
PTHR10877POLYCYSTIN FAMILY MEMBERInterproscan
PTHR16222ADP-RIBOSYLGLYCOHYDROLASEInterproscan
PTHR46609EXONUCLEASE, PHAGE-TYPE/RECB, C-TERMINAL DOMAIN-CONTAINING PROTEINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0031929Biological ProcessTOR signalingInterproscan
GO:0031932Cellular ComponentTORC2 complexInterproscan
GO:0038203Biological ProcessTORC2 signalingInterproscan
GO:0043539Molecular Functionprotein serine/threonine kinase activator activityInterproscan
GO:0051897Biological Processpositive regulation of phosphatidylinositol 3-kinase/protein kinase B signal transductionInterproscan
GO:0008380Biological ProcessRNA splicingInterproscan
GO:0030532Cellular Componentsmall nuclear ribonucleoprotein complexInterproscan
GO:0000387Biological Processspliceosomal snRNP assemblyInterproscan
GO:0005682Cellular ComponentU5 snRNPInterproscan
GO:0005685Cellular ComponentU1 snRNPInterproscan
GO:0005686Cellular ComponentU2 snRNPInterproscan
GO:0034715Cellular ComponentpICln-Sm protein complexInterproscan
GO:0046540Cellular ComponentU4/U6 x U5 tri-snRNP complexInterproscan
GO:0071011Cellular Componentprecatalytic spliceosomeInterproscan
GO:0071013Cellular Componentcatalytic step 2 spliceosomeInterproscan
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0003777Molecular Functionmicrotubule motor activityInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0007018Biological Processmicrotubule-based movementInterproscan
GO:0008017Molecular Functionmicrotubule bindingInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005262Molecular Functioncalcium channel activityInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0050982Biological Processdetection of mechanical stimulusInterproscan
GO:0005509Molecular Functioncalcium ion bindingInterproscan
GO:0004329Molecular Functionformate-tetrahydrofolate ligase activityInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K02362entD; enterobactin synthetase component DEC:6.3.2.14
EC:2.7.8.-
Membrane traffickingko04131deepkoala
Ion channelsko04040deepkoala
DNA replication proteinsko03032deepkoala
Polyketide biosynthesis proteinsko01008deepkoala

TOP