Detailed information of g100.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: MBT4527614.1, endopeptidase La [Deltaproteobacteria bacterium]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
P74956Lon protease OS=Vibrio parahaemolyticus serotype O3:K6 (strain RIMD 2210633) OX=223926 GN=lon PE=3 SV=2
O69177Lon protease OS=Rhizobium meliloti (strain 1021) OX=266834 GN=lon PE=3 SV=2
P43864Lon protease OS=Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) OX=71421 GN=lon PE=3 SV=1
Gene familySubfamily
Transcription Factors Familyzf-C2H2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF14529Exo_endo_phos_2Endonuclease-reverse transcriptase DomainInterproscan
PF07690MFS_1Major Facilitator SuperfamilyFamilyInterproscan
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF01179Cu_amine_oxidCopper amine oxidase, enzyme domainDomainInterproscan
PF02727Cu_amine_oxidN2Copper amine oxidase, N2 domainDomainInterproscan
PF00004AAAATPase family associated with various cellular activities (AAA)DomainInterproscan
PF05362Lon_CLon protease (S16) C-terminal proteolytic domainDomainInterproscan
PF02190LON_substr_bdgATP-dependent protease La (LON) substrate-binding domain FamilyInterproscan
PF12796Ank_2Ankyrin repeats (3 copies)RepeatInterproscan
PF00096zf-C2H2Zinc finger, C2H2 typeDomainInterproscan
PF02779Transket_pyrTransketolase, pyrimidine binding domainDomainInterproscan
PF16870OxoGdeHyase_C2-oxoglutarate dehydrogenase C-terminalFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036691Homologous_superfamilyEndonuclease/exonuclease/phosphatase superfamilyInterproscan
IPR005135DomainEndonuclease/exonuclease/phosphataseInterproscan
IPR036259Homologous_superfamilyMFS transporter superfamilyInterproscan
IPR051068FamilyMajor Facilitator Superfamily Domain-Containing ProteinInterproscan
IPR011701FamilyMajor facilitator superfamilyInterproscan
IPR020846DomainMajor facilitator superfamily domainInterproscan
IPR000477DomainReverse transcriptase domainInterproscan
IPR036460Homologous_superfamilyCopper amine oxidase, catalytic domain superfamilyInterproscan
IPR000269FamilyCopper amine oxidaseInterproscan
IPR015798DomainCopper amine oxidase, catalytic domainInterproscan
IPR049948Conserved_siteCopper amine oxidase, TPQ-binding siteInterproscan
IPR016182Homologous_superfamilyCopper amine oxidase, N-terminalInterproscan
IPR015800DomainCopper amine oxidase, N2-terminalInterproscan
IPR027543FamilyLon protease, bacterialInterproscan
IPR003959DomainATPase, AAA-type, coreInterproscan
IPR027065FamilyLon proteaseInterproscan
IPR008269DomainPeptidase S16, Lon proteolytic domainInterproscan
IPR003111DomainLon protease, N-terminal domainInterproscan
IPR003593DomainAAA+ ATPase domainInterproscan
IPR046336Homologous_superfamilyLon protease, N-terminal domain superfamilyInterproscan
IPR008268Active_sitePeptidase S16, active siteInterproscan
IPR004815FamilyLon protease, bacterial/eukaryotic-typeInterproscan
IPR020568Homologous_superfamilyRibosomal protein uS5 domain 2-type superfamilyInterproscan
IPR015947Homologous_superfamilyPUA-like superfamilyInterproscan
IPR014721Homologous_superfamilySmall ribosomal subunit protein uS5 domain 2-type fold, subgroupInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR036770Homologous_superfamilyAnkyrin repeat-containing domain superfamilyInterproscan
IPR002110RepeatAnkyrin repeatInterproscan
IPR013087DomainZinc finger C2H2-typeInterproscan
IPR036236Homologous_superfamilyZinc finger C2H2 superfamilyInterproscan
IPR050331FamilyZinc fingerInterproscan
IPR011603Family2-oxoglutarate dehydrogenase E1 componentInterproscan
IPR005475DomainTransketolase-like, pyrimidine-binding domainInterproscan
IPR042179Homologous_superfamilyMultifunctional 2-oxoglutarate metabolism enzyme, C-terminal domain superfamilyInterproscan
IPR029061Homologous_superfamilyThiamin diphosphate-binding foldInterproscan
IPR031717DomainMultifunctional 2-oxoglutarate metabolism enzyme, C-terminalInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR33395TRANSCRIPTASE, PUTATIVE-RELATED-RELATEDInterproscan
PTHR23510INNER MEMBRANE TRANSPORT PROTEIN YAJRInterproscan
PTHR47027REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR10638COPPER AMINE OXIDASEInterproscan
PTHR10046ATP DEPENDENT LON PROTEASE FAMILY MEMBERInterproscan
PTHR47331PHD-TYPE DOMAIN-CONTAINING PROTEINInterproscan
PTHR16515PR DOMAIN ZINC FINGER PROTEINInterproscan
PTHR231522-OXOGLUTARATE DEHYDROGENASEInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0007508Biological Processlarval heart developmentInterproscan
GO:0031012Cellular Componentextracellular matrixInterproscan
GO:0061343Biological Processcell adhesion involved in heart morphogenesisInterproscan
GO:0003824Molecular Functioncatalytic activityInterproscan
GO:0022857Molecular Functiontransmembrane transporter activityInterproscan
GO:0055085Biological Processtransmembrane transportInterproscan
GO:0005507Molecular Functioncopper ion bindingInterproscan
GO:0008131Molecular Functionprimary methylamine oxidase activityInterproscan
GO:0009308Biological Processamine metabolic processInterproscan
GO:0048038Molecular Functionquinone bindingInterproscan
GO:0005886Cellular Componentplasma membraneInterproscan
GO:0004176Molecular FunctionATP-dependent peptidase activityInterproscan
GO:0004252Molecular Functionserine-type endopeptidase activityInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0006508Biological ProcessproteolysisInterproscan
GO:0043565Molecular Functionsequence-specific DNA bindingInterproscan
GO:0016887Molecular FunctionATP hydrolysis activityInterproscan
GO:0030163Biological Processprotein catabolic processInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0010468Biological Processregulation of gene expressionInterproscan
GO:0004591Molecular Functionoxoglutarate dehydrogenase (succinyl-transferring) activityInterproscan
GO:0005739Cellular ComponentmitochondrionInterproscan
GO:0006099Biological Processtricarboxylic acid cycleInterproscan
GO:0016624Molecular Functionoxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptorInterproscan
GO:0030976Molecular Functionthiamine pyrophosphate bindingInterproscan
GO:0045252Cellular Componentoxoglutarate dehydrogenase complexInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K19525VPS13A_C; vacuolar protein sorting-associated protein 13A/C-Peptidases and inhibitorsko01002deepkoala
Membrane traffickingko04131deepkoala

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