Detailed information of g1008.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: XP_047136671.1, collagen alpha-1(II) chain [Hydra vulgaris]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
A6NMZ7Collagen alpha-6(VI) chain OS=Homo sapiens OX=9606 GN=COL6A6 PE=1 SV=2
Q14008Cytoskeleton-associated protein 5 OS=Homo sapiens OX=9606 GN=CKAP5 PE=1 SV=3
A2AGT5Cytoskeleton-associated protein 5 OS=Mus musculus OX=10090 GN=Ckap5 PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13359DDE_Tnp_4DDE superfamily endonucleaseDomainInterproscan
PF14529Exo_endo_phos_2Endonuclease-reverse transcriptase DomainInterproscan
PF21041XMAP215_CLASP_TOGXMAP215/Dis1/CLASP, TOG domainRepeatInterproscan
PF21040CEP104-like_TOGCentrosomal protein CEP104-like, TOG domainRepeatInterproscan
PF00092VWAvon Willebrand factor type A domainDomainInterproscan
PF00095WAPWAP-type (Whey Acidic Protein) 'four-disulfide core'DomainInterproscan
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF03638TCRTesmin/TSO1-like CXC domain, cysteine-rich domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR027806DomainHarbinger transposase-derived nuclease domainInterproscan
IPR036691Homologous_superfamilyEndonuclease/exonuclease/phosphatase superfamilyInterproscan
IPR005135DomainEndonuclease/exonuclease/phosphataseInterproscan
IPR021133RepeatHEAT, type 2Interproscan
IPR048491DomainXMAP215/Dis1/CLASP, TOG domainInterproscan
IPR011989Homologous_superfamilyArmadillo-like helicalInterproscan
IPR045110FamilyXMAP215Interproscan
IPR016024Homologous_superfamilyArmadillo-type foldInterproscan
IPR034085DomainTOG domainInterproscan
IPR036465Homologous_superfamilyvon Willebrand factor A-like domain superfamilyInterproscan
IPR050525FamilyExtracellular Matrix Assembly and OrganizationInterproscan
IPR002035Domainvon Willebrand factor, type AInterproscan
IPR008197DomainWAP-type 'four-disulfide core' domainInterproscan
IPR036645Homologous_superfamilyElafin-like superfamilyInterproscan
IPR000477DomainReverse transcriptase domainInterproscan
IPR033467DomainTesmin/TSO1-like CXC domainInterproscan
IPR005172DomainCRC domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR22930UNCHARACTERIZEDInterproscan
PTHR33395TRANSCRIPTASE, PUTATIVE-RELATED-RELATEDInterproscan
PTHR12609MICROTUBULE ASSOCIATED PROTEIN XMAP215Interproscan
PTHR24020COLLAGEN ALPHAInterproscan
PTHR46670ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR47018CXC DOMAIN-CONTAINING PROTEIN-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0007508Biological Processlarval heart developmentInterproscan
GO:0031012Cellular Componentextracellular matrixInterproscan
GO:0061343Biological Processcell adhesion involved in heart morphogenesisInterproscan
GO:0003824Molecular Functioncatalytic activityInterproscan
GO:0015631Molecular Functiontubulin bindingInterproscan
GO:0000776Cellular ComponentkinetochoreInterproscan
GO:0000922Cellular Componentspindle poleInterproscan
GO:0005813Cellular ComponentcentrosomeInterproscan
GO:0007051Biological Processspindle organizationInterproscan
GO:0007052Biological Processmitotic spindle organizationInterproscan
GO:0008017Molecular Functionmicrotubule bindingInterproscan
GO:0030951Biological Processestablishment or maintenance of microtubule cytoskeleton polarityInterproscan
GO:0035371Cellular Componentmicrotubule plus-endInterproscan
GO:0046785Biological Processmicrotubule polymerizationInterproscan
GO:0051010Molecular Functionmicrotubule plus-end bindingInterproscan
GO:0051298Biological Processcentrosome duplicationInterproscan
GO:0061863Molecular Functionmicrotubule plus end polymeraseInterproscan
GO:0005576Cellular Componentextracellular regionInterproscan
GO:0030414Molecular Functionpeptidase inhibitor activityInterproscan

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