Detailed information of g1012.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: XP_001641010.2, 39S ribosomal protein L2, mitochondrial [Nematostella vectensis]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q5T653Large ribosomal subunit protein uL2m OS=Homo sapiens OX=9606 GN=MRPL2 PE=1 SV=2
Q9D773Large ribosomal subunit protein uL2m OS=Mus musculus OX=10090 GN=Mrpl2 PE=1 SV=1
Q498T4Large ribosomal subunit protein uL2m OS=Rattus norvegicus OX=10116 GN=Mrpl2 PE=2 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF00535Glycos_transf_2Glycosyl transferase family 2FamilyInterproscan
PF00328His_Phos_2Histidine phosphatase superfamily (branch 2)FamilyInterproscan
PF13456RVT_3Reverse transcriptase-likeDomainInterproscan
PF03067LPMO_10Lytic polysaccharide mono-oxygenase, cellulose-degradingDomainInterproscan
PF00125HistoneCore histone H2A/H2B/H3/H4DomainInterproscan
PF16211Histone_H2A_CC-terminus of histone H2AFamilyInterproscan
PF00181Ribosomal_L2Ribosomal Proteins L2, RNA binding domainDomainInterproscan
PF03947Ribosomal_L2_CRibosomal Proteins L2, C-terminal domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000477DomainReverse transcriptase domainInterproscan
IPR039949FamilyN-alpha-acetyltransferase 40Interproscan
IPR016181Homologous_superfamilyAcyl-CoA N-acyltransferaseInterproscan
IPR001173DomainGlycosyltransferase 2-likeInterproscan
IPR029044Homologous_superfamilyNucleotide-diphospho-sugar transferasesInterproscan
IPR045885DomainN-acetylgalactosaminyltransferaseInterproscan
IPR050645FamilyHistidine Acid PhosphataseInterproscan
IPR029033Homologous_superfamilyHistidine phosphatase superfamilyInterproscan
IPR033379Active_siteHistidine acid phosphatase active siteInterproscan
IPR000560FamilyHistidine phosphatase superfamily, clade-2Interproscan
IPR043128Homologous_superfamilyReverse transcriptase/Diguanylate cyclase domainInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR036397Homologous_superfamilyRibonuclease H superfamilyInterproscan
IPR002156DomainRibonuclease H domainInterproscan
IPR052282FamilyStarch-active lytic polysaccharide monooxygenaseInterproscan
IPR004302DomainCellulose/chitin-binding protein, N-terminalInterproscan
IPR009072Homologous_superfamilyHistone-foldInterproscan
IPR002119FamilyHistone H2AInterproscan
IPR032458Conserved_siteHistone H2A conserved siteInterproscan
IPR007125DomainHistone H2A/H2B/H3Interproscan
IPR032454DomainHistone H2A, C-terminal domainInterproscan
IPR022666DomainLarge ribosomal subunit protein uL2, RNA-binding domainInterproscan
IPR022669DomainLarge ribosomal subunit protein uL2, C-terminalInterproscan
IPR005880FamilyLarge ribosomal subunit protein uL2, bacterial/organellar-typeInterproscan
IPR002171FamilyLarge ribosomal subunit protein uL2Interproscan
IPR014722Homologous_superfamilyLarge ribosomal subunit protein uL2, domain 2Interproscan
IPR012340Homologous_superfamilyNucleic acid-binding, OB-foldInterproscan
IPR008991Homologous_superfamilyTranslation protein SH3-like domain superfamilyInterproscan
IPR021109Homologous_superfamilyAspartic peptidase domain superfamilyInterproscan
IPR050951FamilyRetrovirus-related Pol polyproteinInterproscan
IPR051228FamilyNADPH Oxidase and PX Domain-ContainingInterproscan
IPR036871Homologous_superfamilyPX domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR20531N-ALPHA-ACETYLTRANSFERASE 40Interproscan
PTHR11675N-ACETYLGALACTOSAMINYLTRANSFERASEInterproscan
PTHR11567ACID PHOSPHATASE-RELATEDInterproscan
PTHR36575BINDING PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_1G14430)-RELATEDInterproscan
PTHR23430HISTONE H2AInterproscan
PTHR13691RIBOSOMAL PROTEIN L2Interproscan
PTHR37984PROTEIN CBG26694Interproscan
PTHR15706SH3 MULTIPLE DOMAINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005634Cellular ComponentnucleusInterproscan
GO:0010485Molecular Functionhistone H4 acetyltransferase activityInterproscan
GO:0043998Molecular Functionhistone H2A acetyltransferase activityInterproscan
GO:1990189Molecular Functionpeptide-serine-alpha-N-acetyltransferase activityInterproscan
GO:0004653Molecular Functionpolypeptide N-acetylgalactosaminyltransferase activityInterproscan
GO:0005794Cellular ComponentGolgi apparatusInterproscan
GO:0006493Biological Processprotein O-linked glycosylationInterproscan
GO:0016311Biological ProcessdephosphorylationInterproscan
GO:0016791Molecular Functionphosphatase activityInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0004523Molecular FunctionRNA-DNA hybrid ribonuclease activityInterproscan
GO:0046982Molecular Functionprotein heterodimerization activityInterproscan
GO:0000786Cellular ComponentnucleosomeInterproscan
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0030527Molecular Functionstructural constituent of chromatinInterproscan
GO:0000790Cellular ComponentchromatinInterproscan
GO:0006342Biological Processheterochromatin formationInterproscan
GO:0003735Molecular Functionstructural constituent of ribosomeInterproscan
GO:0005840Cellular ComponentribosomeInterproscan
GO:0006412Biological ProcesstranslationInterproscan
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0015934Cellular Componentlarge ribosomal subunitInterproscan
GO:0016740Molecular Functiontransferase activityInterproscan
GO:0005762Cellular Componentmitochondrial large ribosomal subunitInterproscan
GO:0032543Biological Processmitochondrial translationInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0035091Molecular Functionphosphatidylinositol bindingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K20794NAA40, NAT4; N-alpha-acetyltransferase 40EC:2.3.1.257
Ribosomeko03011deepkoala
Glycosyltransferasesko01003deepkoala
Exosomeko04147deepkoala
Chromosome and associated proteinsko03036deepkoala

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