Gene detail

Detailed information of g10165.t1 in Tripedalia maipoensis

Genomic Location: scaffold_6:45155547...45171094
NR annotation: no NCBI-NR hit recorded
Species Tripedalia maipoensis · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

g10165.t1

ATGTTTGAAGGAAAGAATATTCATTCTTCACCAGTGGATGGAAAGCCACTCTGCAGCTTTAGTCAGAAGATGTGCATGCAAAGGCGTTTGAATGGCTTTGCATTCTGCATTCGCCACATCCTTGAGGACAGGCATGCACCATTCAAGCAATGCCAGTTTGTGACAAAGTACAATGGAAATCAGTGTATCAATCCTGTGCCTCTAGGGGAGGAACGCATATATTGCAATAGCCACTTACAAGTTCTTGGTCTTGCACCAAAGAAAACCAAGAAGAAACCTCTCTCACTGGAGGGTGTCCTGGATGAAAACTTGTCTCAGAGTGTAGATATGGAGATTGAGCAACAGACTAAGGTTGCTGAACAGCAGCCAAAGCCAAAGACAAAGAGCCAAAGCAACAAAAATAACTTGGGAAAAAATGGAGGGATCATTGAGAGGCCGTATTATTTTGGTACACCTTCAGCCTGGACTTCTCACCAACTTGTTGTCAGCCACTGTTTGAAGAAACAAAGTGCTGCTACCAGTGAGAAGTTTGCTGGCAATGTTACCTTCAAGAGAGTGGAGGATTTCAAAAAATCATTTGAAGTTTGCAAGCAGAAATGGCTTTTGAAAAGATACATGTTTCAAGCAGCAGATGAAGATGAAGGATTGTCATCACATCCTCTTTACCAAGCGGCGTTCGAGTGTCCTAGTGCAAACCCTCCTACTGTAGGTCATAGTCCTAGCTCCATTGCCGAATCTTTAAGTCAGCGGAGGAAAGAGCTTCTGCTTCAGCTGAAACATCAGCGAGCACAGCTTAAGCTTTTTGTACGGGAAAAGTTAGCTGGGAAGGACTTGTCTTATTCAGTGATGGCTAAGCTCGTTTCAGCAGCCAAGGAGAACCCGGCGGCGACGGCCAACGTCTTACTGGGAAAAGCAGAATCCAAACTTTTCAGGGTACGGAAACTGCGCCGTGAAGTAATCAAGTGCACATGTACAGACCCAGATAAGACTTGCGGCCTTTTACCATTGCCATACAGTATGTTTTGTGTTGAGCATATCGGTCATGACAAGCAACAGGTACTATTTGGGACGTGCACGGCCAAGTTTCCTGCCGGCGCGTGCTGTTCAGTCCCCGTGGTGGACTTCATGAACGAAAGACCCCTCTGTCAAGAACATGCCAGGAAACGGGCGGAATCGATCGAAAAGAGCGCACCGCGTACTCCACCTAAGAGGGTAAGGAAAACCACCGGCGAAGAACAGGAAGAAGAAGAGAAAGAAAAAGCTCTGAAGCCAAATGTGGCAAAGAAGAATCTCAAAAACAAGCTGCAGCGCAAGTTTGCGATACCAGTGAAACCAGGCAAGAAAACCGGATTTGCGGGAAAGAAAGTTTCGGCGCCTGAGACCATGCAGAAAGAGTACGGAGCTGGGAGTATTCCTATACGGGAGATGGGACCTGTCACGCTTAATTTGGACGCGGAGAAAAGGAGCGAAATGCGCAACCGTAGAAGGGAAAAATTGCGGGAGATCGCTCAACGAGAGGCACAGTCGAAATTAGCGGCCAGTTCTATTGGGAAAGATTTGGAATCTCGTCTCCCGCGGAGAAATGACAGTTTAGGGGGATCAGCTACCTCTCCCTTTGACATCCAGGAAGACTCCTTATCTTCACCGTCCATCTCTCCCTCTCCCTCGTACGAAATGGATGAGATGGCCACCGAGTACTCCCGAGGCTCACTCCTCGGCATCGACTGCAATCATACGGATAGCTTTGATCCAGACGATGACGAAATGCACCTGCAACTGTCGAAAACATCCAGGTTTACCAACAACTCTACGGGACATTTGACACGTCAGCTTACATCACCCACCCTAAATCAACTGTCGAATTTCGACCGCAAAGGATCGATAGGAACCTTGACCTCTCCGAAAAGATTTCACTTTGCTAGTTCAAGCTCCCTGTCTCCGCAATCTCGAAGACTTTCGTCTCCTCTGAAGCTAGAAGGTACTGATCTTCCCTTCTCGTCCAGTATAACCAGTGTCCCGCATCATTCCGATGGGCTTGGAGCTGAGTCAGGTGTGAGCACGCCCTCTTCTTTGGCAAGCGCGGGTGAAGACGACCGTTATCCTTTGGATGGTGAGGCTGAGGCAAGGTTGTCCCACTCACGTCTGCGAGTCATCAGTCCTCCTAGAGAGTATGGTAACGGTAGAACGAGTCTCGGTAAGGGAAATTGGTCGGCCAAGTTTACGTTGCCCACCAAGGGCGAAGTGTCCCTTCCCTCCGGGTTTATACGAATGTCCCCTCTCTCCTCCTCTTCTCCTTCGAACGCCTCCCTGTACTCACCTCCCTTTGGATTCTCCGGATCACCGCGCTCCAAGACTCAGGTATTCAAGTTTGATTCCGCGGGCAACTTCCATACCAGCACAGAAAACTACACCACCCCTGGCACGCTCCAGTTTTCGTCCGCAAAGGACTCTGTCTTTGTACCTATTCAGGAAAGATTAGTGATGACGGACAAAAGAGCGGAGAAGGAACCGCCCATCGAGAGAGTGAATCCGGACATCTTCTTTTCGCCGGCAGCATTTTCCTCGACGCCAACTTCGGCATCATAG

Transcript

g10165.t1

Protein

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0003855 (this species only) · gene tree & orthology

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13891 all species →	zf-C3Hc3H	Potential DNA-binding domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR025927 all species →	Domain	Potential DNA-binding domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR16198 all species →	UNCHARACTERIZED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005634 all species →	Cellular Component	nucleus	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K11668	INO80D; INO80 complex subunit D	-	Chromosome and associated proteins	ko03036	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.