Detailed information of g1017.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: XP_047131527.1, dual specificity protein kinase splB isoform X2 [Hydra vulgaris]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
Q5NVP8Protein lin-52 homolog OS=Pongo abelii OX=9601 GN=LIN52 PE=3 SV=1
Q52LA3Protein lin-52 homolog OS=Homo sapiens OX=9606 GN=LIN52 PE=1 SV=1
Q8CD94Protein lin-52 homolog OS=Mus musculus OX=10090 GN=Lin52 PE=1 SV=1
Gene familySubfamily
Ubiquitin FamilyUBD|Alpha-Helix|UBAN

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00620RhoGAPRhoGAP domainDomainInterproscan
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF00536SAM_1SAM domain (Sterile alpha motif)DomainInterproscan
PF13520AA_permease_2Amino acid permeaseFamilyInterproscan
PF01400AstacinAstacin (Peptidase family M12A)DomainInterproscan
PF00629MAMMAM domain, meprin/A5/muDomainInterproscan
PF10044LIN52Retinal tissue proteinFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000198DomainRho GTPase-activating protein domainInterproscan
IPR051576FamilyPX Domain-Containing Rho GAPInterproscan
IPR008936Homologous_superfamilyRho GTPase activation proteinInterproscan
IPR051010FamilyBranched-chain amino acid transport proteinInterproscan
IPR028082Homologous_superfamilyPeriplasmic binding protein-like IInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR000477DomainReverse transcriptase domainInterproscan
IPR043128Homologous_superfamilyReverse transcriptase/Diguanylate cyclase domainInterproscan
IPR051320FamilyViral Replication and Maturation PolyproteinInterproscan
IPR001660DomainSterile alpha motif domainInterproscan
IPR013761Homologous_superfamilySterile alpha motif/pointed domain superfamilyInterproscan
IPR050548FamilyPolycomb group and chromatin remodeling factorsInterproscan
IPR038603Homologous_superfamilyFCS-type zinc finger superfamilyInterproscan
IPR002293FamilyAmino acid/polyamine transporter IInterproscan
IPR050598FamilyCellular Amino Acid TransporterInterproscan
IPR013320Homologous_superfamilyConcanavalin A-like lectin/glucanase domain superfamilyInterproscan
IPR000998DomainMAM domainInterproscan
IPR024079Homologous_superfamilyMetallopeptidase, catalytic domain superfamilyInterproscan
IPR001506DomainPeptidase M12AInterproscan
IPR051560FamilyMAM domain-containing proteinInterproscan
IPR018737FamilyProtein LIN52Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR15729CDC42 GTPASE-ACTIVATING PROTEINInterproscan
PTHR30483LEUCINE-SPECIFIC-BINDING PROTEINInterproscan
PTHR33064POL PROTEINInterproscan
PTHR12247POLYCOMB GROUP PROTEINInterproscan
PTHR11785AMINO ACID TRANSPORTERInterproscan
PTHR23282APICAL ENDOSOMAL GLYCOPROTEIN PRECURSOR.Interproscan
PTHR31882TNFAIP3-INTERACTING PROTEIN COILED COIL FAMILY MEMBERInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0007165Biological Processsignal transductionInterproscan
GO:0005096Molecular FunctionGTPase activator activityInterproscan
GO:0007264Biological Processsmall GTPase-mediated signal transductionInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0003682Molecular Functionchromatin bindingInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0035102Cellular ComponentPRC1 complexInterproscan
GO:0042393Molecular Functionhistone bindingInterproscan
GO:0045892Biological Processnegative regulation of DNA-templated transcriptionInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0022857Molecular Functiontransmembrane transporter activityInterproscan
GO:0055085Biological Processtransmembrane transportInterproscan
GO:0003333Biological Processamino acid transmembrane transportInterproscan
GO:0015179Molecular FunctionL-amino acid transmembrane transporter activityInterproscan
GO:0008237Molecular Functionmetallopeptidase activityInterproscan
GO:0004222Molecular Functionmetalloendopeptidase activityInterproscan
GO:0006508Biological ProcessproteolysisInterproscan
GO:0006355Biological Processregulation of DNA-templated transcriptionInterproscan
GO:0070176Cellular ComponentDRM complexInterproscan
GO:0006357Biological Processregulation of transcription by RNA polymerase IIInterproscan
GO:0071222Biological Processcellular response to lipopolysaccharideInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K13868SLC7A9_15, BAT1; solute carrier family 7 (L-type amino acid transporter), member 9/15-Transportersko02000deepkoala

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