Detailed information of g1020.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: CAH3035822.1, unnamed protein product [Porites lobata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q9S1G2DNA polymerase I OS=Rhizobium leguminosarum OX=384 GN=polA PE=3 SV=1
P43741DNA polymerase I OS=Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) OX=71421 GN=polA PE=3 SV=1
P00582DNA polymerase I OS=Escherichia coli (strain K12) OX=83333 GN=polA PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF07690MFS_1Major Facilitator SuperfamilyFamilyInterproscan
PF10217DUF2039Uncharacterized conserved protein (DUF2039)FamilyInterproscan
PF027395_3_exonuc_N5'-3' exonuclease, N-terminal resolvase-like domainDomainInterproscan
PF013675_3_exonuc5'-3' exonuclease, C-terminal SAM foldDomainInterproscan
PF00476DNA_pol_ADNA polymerase family AFamilyInterproscan
PF01612DNA_pol_A_exo13'-5' exonucleaseDomainInterproscan
PF02460PatchedPatched familyFamilyInterproscan
PF09073BUD22BUD22FamilyInterproscan
PF15294Leu_zipLeucine zipperFamilyInterproscan
PF00329Complex1_30kDaRespiratory-chain NADH dehydrogenase, 30 Kd subunitFamilyInterproscan
PF13676TIR_2TIR domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036259Homologous_superfamilyMFS transporter superfamilyInterproscan
IPR011701FamilyMajor facilitator superfamilyInterproscan
IPR020846DomainMajor facilitator superfamily domainInterproscan
IPR019351FamilyProtein of unknown function DUF2039Interproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR018320FamilyDNA polymerase 1Interproscan
IPR029060Homologous_superfamilyPIN-like domain superfamilyInterproscan
IPR020045DomainDNA polymerase I-like, H3TH domainInterproscan
IPR002298FamilyDNA polymerase AInterproscan
IPR008918Conserved_siteHelix-hairpin-helix motif, class 2Interproscan
IPR002421Domain5'-3' exonucleaseInterproscan
IPR002562Domain3'-5' exonuclease domainInterproscan
IPR036279Homologous_superfamily5'-3' exonuclease, C-terminal domain superfamilyInterproscan
IPR019760Conserved_siteDNA-directed DNA polymerase, family A, conserved siteInterproscan
IPR036397Homologous_superfamilyRibonuclease H superfamilyInterproscan
IPR020046Domain5'-3' exonuclease, alpha-helical arch, N-terminalInterproscan
IPR001098DomainDNA-directed DNA polymerase, family A, palm domainInterproscan
IPR012337Homologous_superfamilyRibonuclease H-like superfamilyInterproscan
IPR001036FamilyAcriflavin resistance proteinInterproscan
IPR051697FamilyPatched domain-containing proteinInterproscan
IPR000731DomainSterol-sensing domainInterproscan
IPR003392FamilyProtein patched/dispatchedInterproscan
IPR015158DomainBud22 domainInterproscan
IPR026157FamilyLeucine zipper transcription factor-like protein 1Interproscan
IPR020396Conserved_siteNADH:ubiquinone oxidoreductase, 30kDa subunit, conserved siteInterproscan
IPR037232Homologous_superfamilyNADH:ubiquinone oxidoreductase, 30kDa subunit superfamilyInterproscan
IPR001268DomainNADH:ubiquinone oxidoreductase, 30kDa subunitInterproscan
IPR010218FamilyNADH dehydrogenase, subunit CInterproscan
IPR000157DomainToll/interleukin-1 receptor homology (TIR) domainInterproscan
IPR035897Homologous_superfamilyToll/interleukin-1 receptor homology (TIR) domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR23507ZGC:174356Interproscan
PTHR22876ZGC:101016Interproscan
PTHR10133DNA POLYMERASE IInterproscan
PTHR10796PATCHED-RELATEDInterproscan
PTHR21635LEUCINE ZIPPER TRANSCRIPTION FACTOR LIKEInterproscan
PTHR10884NADH DEHYDROGENASE UBIQUINONE IRON-SULFUR PROTEIN 3Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0022857Molecular Functiontransmembrane transporter activityInterproscan
GO:0055085Biological Processtransmembrane transportInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0003887Molecular FunctionDNA-directed DNA polymerase activityInterproscan
GO:0006260Biological ProcessDNA replicationInterproscan
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0003824Molecular Functioncatalytic activityInterproscan
GO:0006261Biological ProcessDNA-templated DNA replicationInterproscan
GO:0006302Biological Processdouble-strand break repairInterproscan
GO:0008409Molecular Function5'-3' exonuclease activityInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0006139Biological Processnucleobase-containing compound metabolic processInterproscan
GO:0008408Molecular Function3'-5' exonuclease activityInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:1903565Biological Processnegative regulation of protein localization to ciliumInterproscan
GO:0016651Molecular Functionoxidoreductase activity, acting on NAD(P)HInterproscan
GO:0008137Molecular FunctionNADH dehydrogenase (ubiquinone) activityInterproscan
GO:0005747Cellular Componentobsolete mitochondrial respiratory chain complex IInterproscan
GO:0007165Biological Processsignal transductionInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K03936NDUFS3; NADH dehydrogenase (ubiquinone) Fe-S protein 3EC:7.1.1.2
DNA repair and recombination proteinsko03400deepkoala
Transportersko02000deepkoala
Non-alcoholic fatty liver diseaseko04932deepkoala

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