Gene detail

Detailed information of g10200.t1 in Montipora capitata

Genomic Location: Sc0000281:365117...373191
NR annotation: CAH3152512.1, unnamed protein product [Porites lobata]
Species Montipora capitata · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q8VZI2	DUF21 domain-containing protein At4g33700 OS=Arabidopsis thaliana OX=3702 GN=CBSDUF6 PE=1 SV=1
Q9ZQR4	DUF21 domain-containing protein At2g14520 OS=Arabidopsis thaliana OX=3702 GN=CBSDUF3 PE=2 SV=2
Q9LTD8	DUF21 domain-containing protein At5g52790 OS=Arabidopsis thaliana OX=3702 GN=CBSDUF5 PE=2 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0001932 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF03810 all species →	IBN_N	Importin-beta N-terminal domain	Repeat	Interproscan
PF01595 all species →	CNNM	Cyclin M transmembrane N-terminal domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR016024 all species →	Homologous_superfamily	Armadillo-type fold	Interproscan
IPR002550 all species →	Domain	CNNM, transmembrane domain	Interproscan
IPR001494 all species →	Domain	Importin-beta, N-terminal domain	Interproscan
IPR045095 all species →	Family	Ancient conserved domain protein family	Interproscan
IPR011989 all species →	Homologous_superfamily	Armadillo-like helical	Interproscan
IPR046342 all species →	Homologous_superfamily	CBS domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12064 all species →	METAL TRANSPORTER CNNM	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0006886 all species →	Biological Process	intracellular protein transport	Interproscan
GO:0031267 all species →	Molecular Function	small GTPase binding	Interproscan
GO:0010960 all species →	Biological Process	magnesium ion homeostasis	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K16302	CNNM; metal transporter CNNM	-	Transporters	ko02000	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.