Gene detail

Detailed information of g10206.t1 in Acropora digitifera

Genomic Location: chr5Alt:169695...176735
NR annotation: XP_015770293.1, PREDICTED: ubiquitin-conjugating enzyme E2 K-like [Acropora digitifera]
Species Acropora digitifera · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
P61085	Ubiquitin-conjugating enzyme E2 K OS=Bos taurus OX=9913 GN=UBE2K PE=1 SV=3
P61086	Ubiquitin-conjugating enzyme E2 K OS=Homo sapiens OX=9606 GN=UBE2K PE=1 SV=3
P61087	Ubiquitin-conjugating enzyme E2 K OS=Mus musculus OX=10090 GN=Ube2k PE=1 SV=3

Gene family

Family type	Membership / link
Ubiquitin family	E2\|UBC\|UBC · all ubiquitin genes in this species
Ubiquitin family	UBD\|Alpha-Helix\|UBA · all ubiquitin genes in this species
Ubiquitin family	UBD\|UBC-like\|UBC · all ubiquitin genes in this species
Ubiquitin family	UBD\|UBC-like\|UEV · all ubiquitin genes in this species
Ubiquitin family	E2\|UEV\|UEV · all ubiquitin genes in this species

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00179 all species →	UQ_con	Ubiquitin-conjugating enzyme	Domain	Interproscan
PF00627 all species →	UBA	UBA/TS-N domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000608 all species →	Domain	Ubiquitin-conjugating enzyme E2	Interproscan
IPR023313 all species →	Active_site	Ubiquitin-conjugating enzyme, active site	Interproscan
IPR016135 all species →	Homologous_superfamily	Ubiquitin-conjugating enzyme/RWD-like	Interproscan
IPR015940 all species →	Domain	Ubiquitin-associated domain	Interproscan
IPR009060 all species →	Homologous_superfamily	UBA-like superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24068 all species →	UBIQUITIN-CONJUGATING ENZYME E2	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0000209 all species →	Biological Process	protein polyubiquitination	Interproscan
GO:0005634 all species →	Cellular Component	nucleus	Interproscan
GO:0043161 all species →	Biological Process	proteasome-mediated ubiquitin-dependent protein catabolic process	Interproscan
GO:0061631 all species →	Molecular Function	ubiquitin conjugating enzyme activity	Interproscan
GO:0005515 all species →	Molecular Function	protein binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K04649	UBE2K, HIP2, UBC1; ubiquitin-conjugating enzyme (huntingtin interacting protein 2)	EC:2.3.2.23	Ubiquitin system	ko04121	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.