Detailed information of g1021.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: XP_019621828.1, PREDICTED: methionine adenosyltransferase 2 subunit beta-like [Branchiostoma belcheri]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q99LB6Methionine adenosyltransferase 2 subunit beta OS=Mus musculus OX=10090 GN=Mat2b PE=1 SV=1
Q29RI9Methionine adenosyltransferase 2 subunit beta OS=Bos taurus OX=9913 GN=MAT2B PE=2 SV=1
Q5U2R0Methionine adenosyltransferase 2 subunit beta OS=Rattus norvegicus OX=10116 GN=Mat2b PE=2 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF03474DMADMRTA motifDomainInterproscan
PF00751DMDM DNA binding domainFamilyInterproscan
PF07690MFS_1Major Facilitator SuperfamilyFamilyInterproscan
PF00005ABC_tranABC transporterDomainInterproscan
PF00076RRM_1RNA recognition motifDomainInterproscan
PF07727RVT_2Reverse transcriptase (RNA-dependent DNA polymerase)FamilyInterproscan
PF00125HistoneCore histone H2A/H2B/H3/H4DomainInterproscan
PF00294PfkBpfkB family carbohydrate kinaseDomainInterproscan
PF04321RmlD_sub_bindRmlD substrate binding domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036407Homologous_superfamilyDM DNA-binding domain superfamilyInterproscan
IPR001275DomainDM DNA-binding domainInterproscan
IPR026607FamilyDMRT familyInterproscan
IPR003892DomainUbiquitin system component CUEInterproscan
IPR005173DomainDMRTA motifInterproscan
IPR036259Homologous_superfamilyMFS transporter superfamilyInterproscan
IPR011701FamilyMajor facilitator superfamilyInterproscan
IPR003593DomainAAA+ ATPase domainInterproscan
IPR050763FamilyABC transporter ATP-binding componentInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR017871Conserved_siteABC transporter-like, conserved siteInterproscan
IPR003439DomainABC transporter-like, ATP-binding domainInterproscan
IPR012677Homologous_superfamilyNucleotide-binding alpha-beta plait domain superfamilyInterproscan
IPR000504DomainRNA recognition motif domainInterproscan
IPR035979Homologous_superfamilyRNA-binding domain superfamilyInterproscan
IPR027157FamilyNuclear cap-binding protein subunit 2Interproscan
IPR034148DomainNCBP2, RNA recognition motifInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR013103DomainReverse transcriptase, RNA-dependent DNA polymeraseInterproscan
IPR026590DomainSirtuin family, catalytic core domainInterproscan
IPR029035Homologous_superfamilyDHS-like NAD/FAD-binding domain superfamilyInterproscan
IPR005343FamilyNucleolar complex protein 2Interproscan
IPR000164FamilyHistone H3/CENP-AInterproscan
IPR009072Homologous_superfamilyHistone-foldInterproscan
IPR007125DomainHistone H2A/H2B/H3Interproscan
IPR011611DomainCarbohydrate kinase PfkBInterproscan
IPR029056Homologous_superfamilyRibokinase-likeInterproscan
IPR052562FamilyKetohexokinase-relatedInterproscan
IPR036291Homologous_superfamilyNAD(P)-binding domain superfamilyInterproscan
IPR029903DomainRmlD-like substrate binding domainInterproscan
IPR005913FamilydTDP-4-dehydrorhamnose reductase familyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12322DOUBLESEX AND MAB-3 RELATED TRANSCRIPTION FACTOR DMRTInterproscan
PTHR23511SYNAPTIC VESICLE GLYCOPROTEIN 2Interproscan
PTHR42711ABC TRANSPORTER ATP-BINDING PROTEINInterproscan
PTHR1884720 KD NUCLEAR CAP BINDING PROTEINInterproscan
PTHR42648TRANSPOSASE, PUTATIVE-RELATEDInterproscan
PTHR12687NUCLEOLAR COMPLEX 2 AND RAD4-RELATEDInterproscan
PTHR11426HISTONE H3Interproscan
PTHR42774PHOSPHOTRANSFERASE SYSTEM TRANSPORT PROTEINInterproscan
PTHR10491DTDP-4-DEHYDRORHAMNOSE REDUCTASEInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0006355Biological Processregulation of DNA-templated transcriptionInterproscan
GO:0043565Molecular Functionsequence-specific DNA bindingInterproscan
GO:0000978Molecular FunctionRNA polymerase II cis-regulatory region sequence-specific DNA bindingInterproscan
GO:0000981Molecular FunctionDNA-binding transcription factor activity, RNA polymerase II-specificInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006357Biological Processregulation of transcription by RNA polymerase IIInterproscan
GO:0007548Biological Processsex differentiationInterproscan
GO:0043130Molecular Functionubiquitin bindingInterproscan
GO:0016021Cellular ComponentmembraneInterproscan
GO:0022857Molecular Functiontransmembrane transporter activityInterproscan
GO:0055085Biological Processtransmembrane transportInterproscan
GO:0016887Molecular FunctionATP hydrolysis activityInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0000339Molecular FunctionRNA cap bindingInterproscan
GO:0000398Biological ProcessmRNA splicing, via spliceosomeInterproscan
GO:0005846Cellular Componentnuclear cap binding complexInterproscan
GO:0045292Biological ProcessmRNA cis splicing, via spliceosomeInterproscan
GO:0005654Cellular ComponentnucleoplasmInterproscan
GO:0005730Cellular ComponentnucleolusInterproscan
GO:0030690Cellular ComponentNoc1p-Noc2p complexInterproscan
GO:0030691Cellular ComponentNoc2p-Noc3p complexInterproscan
GO:0042273Biological Processribosomal large subunit biogenesisInterproscan
GO:0000786Cellular ComponentnucleosomeInterproscan
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0030527Molecular Functionstructural constituent of chromatinInterproscan
GO:0046982Molecular Functionprotein heterodimerization activityInterproscan
GO:0006556Biological ProcessS-adenosylmethionine biosynthetic processInterproscan
GO:0048269Cellular Componentmethionine adenosyltransferase complexInterproscan
GO:0048270Molecular Functionmethionine adenosyltransferase regulator activityInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K11253H3; histone H3-Spliceosomeko03041deepkoala
Transportersko02000deepkoala
Exosomeko04147deepkoala

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