Detailed information of g1022.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: RMX59160.1, hypothetical protein pdam_00022950 [Pocillopora damicornis]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q9D7N6Large ribosomal subunit protein uL30m OS=Mus musculus OX=10090 GN=Mrpl30 PE=1 SV=1
P0C2C1Large ribosomal subunit protein uL30m OS=Rattus norvegicus OX=10116 GN=Mrpl30 PE=1 SV=1
A8GVD2Large ribosomal subunit protein uL30 OS=Rickettsia bellii (strain OSU 85-389) OX=391896 GN=rpmD PE=3 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00132HexapepBacterial transferase hexapeptide (six repeats)RepeatInterproscan
PF00588SpoU_methylaseSpoU rRNA Methylase familyFamilyInterproscan
PF00147Fibrinogen_CFibrinogen beta and gamma chains, C-terminal globular domainDomainInterproscan
PF14939DCAF15_WD40DDB1-and CUL4-substrate receptor 15, WD repeatRepeatInterproscan
PF16905GPHHVoltage-dependent L-type calcium channel, IQ-associatedFamilyInterproscan
PF08763Ca_chan_IQVoltage gated calcium channel IQ domainDomainInterproscan
PF00520Ion_transIon transport proteinFamilyInterproscan
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF18400Thioredoxin_12Thioredoxin-like domainDomainInterproscan
PF01196Ribosomal_L17Ribosomal protein L17FamilyInterproscan
PF01554MatEMatEFamilyInterproscan
PF00327Ribosomal_L30Ribosomal protein L30p/L7eDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001451RepeatHexapeptide repeatInterproscan
IPR050486FamilyMannose-1-phosphate guanyltransferaseInterproscan
IPR011004Homologous_superfamilyTrimeric LpxA-like superfamilyInterproscan
IPR018357Conserved_siteHexapeptide transferase, conserved siteInterproscan
IPR001537DomaintRNA/rRNA methyltransferase, SpoU typeInterproscan
IPR029028Homologous_superfamilyAlpha/beta knot methyltransferasesInterproscan
IPR029026Homologous_superfamilytRNA (guanine-N1-)-methyltransferase, N-terminalInterproscan
IPR004384FamilyRNA methyltransferase TrmJ/LasTInterproscan
IPR002181DomainFibrinogen, alpha/beta/gamma chain, C-terminal globular domainInterproscan
IPR014716Homologous_superfamilyFibrinogen, alpha/beta/gamma chain, C-terminal globular, subdomain 1Interproscan
IPR050373FamilyFibrinogen C-terminal domain-containing proteinInterproscan
IPR020837Conserved_siteFibrinogen, conserved siteInterproscan
IPR036056Homologous_superfamilyFibrinogen-like, C-terminalInterproscan
IPR038914FamilyDDB1- and CUL4-associated factor 15Interproscan
IPR032734DomainDDB1- and CUL4-associated factor 15, WD40 repeat-containing domainInterproscan
IPR014873DomainVoltage-dependent calcium channel, alpha-1 subunit, IQ domainInterproscan
IPR031649DomainVoltage-dependent L-type calcium channel, IQ-associated domainInterproscan
IPR027359Homologous_superfamilyVoltage-dependent channel domain superfamilyInterproscan
IPR005821DomainIon transport domainInterproscan
IPR002077FamilyVoltage-dependent calcium channel, alpha-1 subunitInterproscan
IPR050599FamilyVoltage-dependent calcium channel alpha-1 subunitInterproscan
IPR000477DomainReverse transcriptase domainInterproscan
IPR009448FamilyUDP-glucose:Glycoprotein GlucosyltransferaseInterproscan
IPR040693DomainUGGT, thioredoxin-like domain 1Interproscan
IPR045069FamilyMultidrug and toxic compound extrusion family, eukaryoticInterproscan
IPR036373Homologous_superfamilyLarge ribosomal subunit protein bL17 superfamilyInterproscan
IPR000456FamilyLarge ribosomal subunit protein bL17Interproscan
IPR002528FamilyMulti antimicrobial extrusion proteinInterproscan
IPR036919Homologous_superfamilyLarge ribosomal subunit protein uL30, ferredoxin-like fold domain superfamilyInterproscan
IPR016082DomainLarge ribosomal subunit protein uL30-like, ferredoxin-like fold domainInterproscan
IPR005996FamilyLarge ribosomal subunit protein uL30, bacterial-typeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR22572SUGAR-1-PHOSPHATE GUANYL TRANSFERASEInterproscan
PTHR47577THAP DOMAIN-CONTAINING PROTEIN 6Interproscan
PTHR42786TRNA/RRNA METHYLTRANSFERASEInterproscan
PTHR19143FIBRINOGEN/TENASCIN/ANGIOPOEITINInterproscan
PTHR28541DDB1- AND CUL4-ASSOCIATED FACTOR 15Interproscan
PTHR45628VOLTAGE-DEPENDENT CALCIUM CHANNEL TYPE A SUBUNIT ALPHA-1Interproscan
PTHR11226UDP-GLUCOSE GLYCOPROTEIN:GLUCOSYLTRANSFERASEInterproscan
PTHR11206MULTIDRUG RESISTANCE PROTEINInterproscan
PTHR15892MITOCHONDRIAL RIBOSOMAL PROTEIN L30Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0004475Molecular Functionmannose-1-phosphate guanylyltransferase (GTP) activityInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0006486Biological Processprotein glycosylationInterproscan
GO:0009298Biological ProcessGDP-mannose biosynthetic processInterproscan
GO:0016779Molecular Functionnucleotidyltransferase activityInterproscan
GO:0016740Molecular Functiontransferase activityInterproscan
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0006396Biological ProcessRNA processingInterproscan
GO:0008173Molecular FunctionRNA methyltransferase activityInterproscan
GO:0002128Biological ProcesstRNA nucleoside ribose methylationInterproscan
GO:0005829Cellular ComponentcytosolInterproscan
GO:0052665Molecular Functionobsolete tRNA (uracil-2'-O-)-methyltransferase activityInterproscan
GO:0052666Molecular Functionobsolete tRNA (cytosine-2'-O-)-methyltransferase activityInterproscan
GO:0016567Biological Processprotein ubiquitinationInterproscan
GO:0080008Cellular ComponentCul4-RING E3 ubiquitin ligase complexInterproscan
GO:0005216Molecular Functionmonoatomic ion channel activityInterproscan
GO:0006811Biological Processmonoatomic ion transportInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0055085Biological Processtransmembrane transportInterproscan
GO:0005245Molecular Functionvoltage-gated calcium channel activityInterproscan
GO:0005891Cellular Componentvoltage-gated calcium channel complexInterproscan
GO:0070588Biological Processcalcium ion transmembrane transportInterproscan
GO:0007268Biological Processchemical synaptic transmissionInterproscan
GO:0008331Molecular Functionhigh voltage-gated calcium channel activityInterproscan
GO:0098703Biological Processcalcium ion import across plasma membraneInterproscan
GO:0003980Molecular FunctionUDP-glucose:glycoprotein glucosyltransferase activityInterproscan
GO:0005783Cellular Componentendoplasmic reticulumInterproscan
GO:0018279Biological Processprotein N-linked glycosylation via asparagineInterproscan
GO:0051082Molecular Functionunfolded protein bindingInterproscan
GO:0071712Biological Processobsolete ER-associated misfolded protein catabolic processInterproscan
GO:0042910Molecular Functionxenobiotic transmembrane transporter activityInterproscan
GO:1990961Biological Processxenobiotic detoxification by transmembrane export across the plasma membraneInterproscan
GO:0022857Molecular Functiontransmembrane transporter activityInterproscan
GO:0003735Molecular Functionstructural constituent of ribosomeInterproscan
GO:0005840Cellular ComponentribosomeInterproscan
GO:0006412Biological ProcesstranslationInterproscan
GO:0015297Molecular Functionantiporter activityInterproscan
GO:0005739Cellular ComponentmitochondrionInterproscan
GO:0015934Cellular Componentlarge ribosomal subunitInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K03327SLC47A, MATE, DTX; MATE family, multidrug and toxin extrusion protein-Transportersko02000deepkoala

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