Detailed information of g1023.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: XP_021346570.1, COMM domain-containing protein 5-like [Mizuhopecten yessoensis]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q9GZQ3COMM domain-containing protein 5 OS=Homo sapiens OX=9606 GN=COMMD5 PE=1 SV=1
Q8R395COMM domain-containing protein 5 OS=Mus musculus OX=10090 GN=Commd5 PE=1 SV=1
Q9ERR2COMM domain-containing protein 5 OS=Rattus norvegicus OX=10116 GN=Commd5 PE=2 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF07258COMM_domainCOMM domainDomainInterproscan
PF00191AnnexinAnnexinDomainInterproscan
PF00090TSP_1Thrombospondin type 1 domainDomainInterproscan
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF04055Radical_SAMRadical SAM superfamilyDomainInterproscan
PF21016RlmN_NRibosomal RNA large subunit methyltransferase N-terminal domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR037357FamilyCOMM domain-containing protein 5Interproscan
IPR017920DomainCOMM domainInterproscan
IPR037104Homologous_superfamilyAnnexin superfamilyInterproscan
IPR018502RepeatAnnexin repeatInterproscan
IPR001464FamilyAnnexinInterproscan
IPR000884RepeatThrombospondin type-1 (TSP1) repeatInterproscan
IPR036383Homologous_superfamilyThrombospondin type-1 (TSP1) repeat superfamilyInterproscan
IPR052065FamilyComplement and asymmetry regulatorInterproscan
IPR043128Homologous_superfamilyReverse transcriptase/Diguanylate cyclase domainInterproscan
IPR000477DomainReverse transcriptase domainInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR004383FamilyRibosomal RNA large subunit methyltransferase RlmN/CfrInterproscan
IPR007197DomainRadical SAMInterproscan
IPR027492FamilyDual-specificity RNA methyltransferase RlmNInterproscan
IPR048641DomainDual-specificity RNA methyltransferase RlmN, N-terminal domainInterproscan
IPR013785Homologous_superfamilyAldolase-type TIM barrelInterproscan
IPR040072FamilyMethyltransferase (Class A)Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR15666COMM DOMAIN CONTAINING PROTEIN 5Interproscan
PTHR10502ANNEXINInterproscan
PTHR22906PROPERDINInterproscan
PTHR21301REVERSE TRANSCRIPTASEInterproscan
PTHR3054423S RRNA METHYLTRANSFERASEInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005634Cellular ComponentnucleusInterproscan
GO:0005509Molecular Functioncalcium ion bindingInterproscan
GO:0005544Molecular Functioncalcium-dependent phospholipid bindingInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0006364Biological ProcessrRNA processingInterproscan
GO:0008173Molecular FunctionRNA methyltransferase activityInterproscan
GO:0003824Molecular Functioncatalytic activityInterproscan
GO:0051536Molecular Functioniron-sulfur cluster bindingInterproscan
GO:0030488Biological ProcesstRNA methylationInterproscan
GO:0070475Biological ProcessrRNA base methylationInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K06941rlmN; 23S rRNA (adenine2503-C2)-methyltransferaseEC:2.1.1.192
Ribosome biogenesisko03009deepkoala

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