Detailed information of g1025.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: CAH3028716.1, unnamed protein product, partial [Porites evermanni]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P49746Thrombospondin-3 OS=Homo sapiens OX=9606 GN=THBS3 PE=1 SV=1
Q9R0G6Cartilage oligomeric matrix protein OS=Mus musculus OX=10090 GN=Comp PE=1 SV=2
Q05895Thrombospondin-3 OS=Mus musculus OX=10090 GN=Thbs3 PE=1 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01997TranslinTranslin familyFamilyInterproscan
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF00665rveIntegrase core domainDomainInterproscan
PF17917RT_RNaseHRNase H-like domain found in reverse transcriptaseDomainInterproscan
PF17921Integrase_H2C2Integrase zinc binding domainDomainInterproscan
PF03175DNA_pol_B_2DNA polymerase type B, organellar and viralFamilyInterproscan
PF00168C2C2 domainDomainInterproscan
PF00625Guanylate_kinGuanylate kinaseDomainInterproscan
PF00084SushiSushi repeat (SCR repeat)DomainInterproscan
PF00092VWAvon Willebrand factor type A domainDomainInterproscan
PF02412TSP_3Thrombospondin type 3 repeatDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR016069Homologous_superfamilyTranslin, C-terminalInterproscan
IPR002848FamilyTranslin familyInterproscan
IPR036081Homologous_superfamilyTranslin superfamilyInterproscan
IPR036397Homologous_superfamilyRibonuclease H superfamilyInterproscan
IPR000477DomainReverse transcriptase domainInterproscan
IPR012337Homologous_superfamilyRibonuclease H-like superfamilyInterproscan
IPR043128Homologous_superfamilyReverse transcriptase/Diguanylate cyclase domainInterproscan
IPR001584DomainIntegrase, catalytic coreInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR041373DomainReverse transcriptase, RNase H-like domainInterproscan
IPR050951FamilyRetrovirus-related Pol polyproteinInterproscan
IPR041588DomainIntegrase zinc-binding domainInterproscan
IPR044925Homologous_superfamilyHis-Me finger superfamilyInterproscan
IPR004868DomainDNA-directed DNA polymerase, family B, mitochondria/virusInterproscan
IPR000008DomainC2 domainInterproscan
IPR008144DomainGuanylate kinase-like domainInterproscan
IPR035892Homologous_superfamilyC2 domain superfamilyInterproscan
IPR031468DomainSynaptotagmin-like mitochondrial-lipid-binding domainInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR008145DomainGuanylate kinase/L-type calcium channel beta subunitInterproscan
IPR052455FamilyTricalbin domain-containing proteinInterproscan
IPR000436DomainSushi/SCR/CCP domainInterproscan
IPR035976Homologous_superfamilySushi/SCR/CCP superfamilyInterproscan
IPR051277FamilySEZ6/CSMD/C4BPB Neuronal & Immune RegulatorsInterproscan
IPR036465Homologous_superfamilyvon Willebrand factor A-like domain superfamilyInterproscan
IPR002035Domainvon Willebrand factor, type AInterproscan
IPR018184Conserved_siteIntegrin alpha chain, C-terminal cytoplasmic region, conserved siteInterproscan
IPR000742DomainEGF-like domainInterproscan
IPR017897RepeatThrombospondin, type 3 repeatInterproscan
IPR028974Homologous_superfamilyTSP type-3 repeatInterproscan
IPR001881DomainEGF-like calcium-binding domainInterproscan
IPR013320Homologous_superfamilyConcanavalin A-like lectin/glucanase domain superfamilyInterproscan
IPR003367RepeatThrombospondin, type 3-like repeatInterproscan
IPR018097Conserved_siteEGF-like calcium-binding, conserved siteInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10741TRANSLIN AND TRANSLIN ASSOCIATED PROTEIN XInterproscan
PTHR37984PROTEIN CBG26694Interproscan
PTHR46585INTEGRASE CORE DOMAIN CONTAINING PROTEINInterproscan
PTHR31511PROTEIN CBG23764Interproscan
PTHR46980TRICALBIN-1-RELATEDInterproscan
PTHR45656PROTEIN CBR-CLEC-78Interproscan
PTHR10199THROMBOSPONDINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0043565Molecular Functionsequence-specific DNA bindingInterproscan
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0015074Biological ProcessDNA integrationInterproscan
GO:0000166Molecular Functionnucleotide bindingInterproscan
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0003887Molecular FunctionDNA-directed DNA polymerase activityInterproscan
GO:0006260Biological ProcessDNA replicationInterproscan
GO:0008289Molecular Functionlipid bindingInterproscan
GO:0005509Molecular Functioncalcium ion bindingInterproscan
GO:0007155Biological Processcell adhesionInterproscan
GO:0062023Cellular Componentcollagen-containing extracellular matrixInterproscan

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