Detailed information of g1026.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: CAH6779726.1, Comp [Phodopus roborovskii]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
Q9R0G6Cartilage oligomeric matrix protein OS=Mus musculus OX=10090 GN=Comp PE=1 SV=2
P49747Cartilage oligomeric matrix protein OS=Homo sapiens OX=9606 GN=COMP PE=1 SV=2
P35445Cartilage oligomeric matrix protein OS=Bos taurus OX=9913 GN=COMP PE=1 SV=2
Gene familySubfamily
Transcription Factors Familyzf-C2H2
Transcription Factors FamilyETS

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF02412TSP_3Thrombospondin type 3 repeatDomainInterproscan
PF00096zf-C2H2Zinc finger, C2H2 typeDomainInterproscan
PF05735TSP_CThrombospondin C-terminal regionFamilyInterproscan
PF13520AA_permease_2Amino acid permeaseFamilyInterproscan
PF13906AA_permease_CC-terminus of AA_permeaseDomainInterproscan
PF00178EtsEts-domainDomainInterproscan
PF05458SivaCd27 binding protein (Siva)FamilyInterproscan
PF21383DPAGT1_insDPAGT1 insertion domainDomainInterproscan
PF00953Glycos_transf_4Glycosyl transferase family 4FamilyInterproscan
PF11717Tudor-knotRNA binding activity-knot of a chromodomain FamilyInterproscan
PF17039Glyco_tran_10_NFucosyltransferase, N-terminalDomainInterproscan
PF00852Glyco_transf_10Glycosyltransferase family 10 (fucosyltransferase) C-termFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR009030Homologous_superfamilyGrowth factor receptor cysteine-rich domain superfamilyInterproscan
IPR000742DomainEGF-like domainInterproscan
IPR013087DomainZinc finger C2H2-typeInterproscan
IPR017897RepeatThrombospondin, type 3 repeatInterproscan
IPR013320Homologous_superfamilyConcanavalin A-like lectin/glucanase domain superfamilyInterproscan
IPR028974Homologous_superfamilyTSP type-3 repeatInterproscan
IPR018097Conserved_siteEGF-like calcium-binding, conserved siteInterproscan
IPR036236Homologous_superfamilyZinc finger C2H2 superfamilyInterproscan
IPR008859DomainThrombospondin, C-terminalInterproscan
IPR003367RepeatThrombospondin, type 3-like repeatInterproscan
IPR001881DomainEGF-like calcium-binding domainInterproscan
IPR002293FamilyAmino acid/polyamine transporter IInterproscan
IPR029485DomainCationic amino acid transporter, C-terminalInterproscan
IPR000418DomainEts domainInterproscan
IPR046328FamilyETS familyInterproscan
IPR036390Homologous_superfamilyWinged helix DNA-binding domain superfamilyInterproscan
IPR036388Homologous_superfamilyWinged helix-like DNA-binding domain superfamilyInterproscan
IPR022773FamilySivaInterproscan
IPR048439DomainDPAGT1, insertion domainInterproscan
IPR000715FamilyGlycosyl transferase, family 4Interproscan
IPR033895FamilyUDP-GlcNAc-dolichyl-phosphate GlcNAc phosphotransferaseInterproscan
IPR023211Homologous_superfamilyDNA polymerase, palm domain superfamilyInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR025995DomainRNA binding activity-knot of a chromodomainInterproscan
IPR001584DomainIntegrase, catalytic coreInterproscan
IPR016197Homologous_superfamilyChromo-like domain superfamilyInterproscan
IPR036397Homologous_superfamilyRibonuclease H superfamilyInterproscan
IPR012337Homologous_superfamilyRibonuclease H-like superfamilyInterproscan
IPR000953DomainChromo/chromo shadow domainInterproscan
IPR001503FamilyGlycosyl transferase family 10Interproscan
IPR038577Homologous_superfamilyGT10-like, C-terminal domain superfamilyInterproscan
IPR031481DomainFucosyltransferase, N-terminalInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10199THROMBOSPONDINInterproscan
PTHR43243INNER MEMBRANE TRANSPORTER YGJI-RELATEDInterproscan
PTHR47027REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR11849ETSInterproscan
PTHR14365APOPTOSIS REGULATORY PROTEIN SIVAInterproscan
PTHR10571UDP-N-ACETYLGLUCOSAMINE--DOLICHYL-PHOSPHATE N-ACETYLGLUCOSAMINEPHOSPHOTRANSFERASEInterproscan
PTHR31511PROTEIN CBG23764Interproscan
PTHR46585INTEGRASE CORE DOMAIN CONTAINING PROTEINInterproscan
PTHR11929ALPHA- 1,3 -FUCOSYLTRANSFERASEInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005509Molecular Functioncalcium ion bindingInterproscan
GO:0005576Cellular Componentextracellular regionInterproscan
GO:0007155Biological Processcell adhesionInterproscan
GO:0062023Cellular Componentcollagen-containing extracellular matrixInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0022857Molecular Functiontransmembrane transporter activityInterproscan
GO:0055085Biological Processtransmembrane transportInterproscan
GO:0005886Cellular Componentplasma membraneInterproscan
GO:0006865Biological Processamino acid transportInterproscan
GO:0015171Molecular Functionamino acid transmembrane transporter activityInterproscan
GO:0003700Molecular FunctionDNA-binding transcription factor activityInterproscan
GO:0006355Biological Processregulation of DNA-templated transcriptionInterproscan
GO:0043565Molecular Functionsequence-specific DNA bindingInterproscan
GO:0000981Molecular FunctionDNA-binding transcription factor activity, RNA polymerase II-specificInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006357Biological Processregulation of transcription by RNA polymerase IIInterproscan
GO:0030154Biological Processcell differentiationInterproscan
GO:0005175Molecular FunctionCD27 receptor bindingInterproscan
GO:0097191Biological Processextrinsic apoptotic signaling pathwayInterproscan
GO:0016780Molecular Functionphosphotransferase activity, for other substituted phosphate groupsInterproscan
GO:0003975Molecular FunctionUDP-N-acetylglucosamine-dolichyl-phosphate N-acetylglucosaminephosphotransferase activityInterproscan
GO:0006487Biological Processprotein N-linked glycosylationInterproscan
GO:0006488Biological Processdolichol-linked oligosaccharide biosynthetic processInterproscan
GO:0016021Cellular ComponentmembraneInterproscan
GO:0015074Biological ProcessDNA integrationInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0006486Biological Processprotein glycosylationInterproscan
GO:0008417Molecular Functionfucosyltransferase activityInterproscan
GO:0036065Biological ProcessfucosylationInterproscan
GO:0046920Molecular Functionalpha-(1->3)-fucosyltransferase activityInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K14464FUT-1, FucTC; alpha-1,3-fucosyltransferaseEC:2.4.1.-
p53 signaling pathwayko04115deepkoala
Various types of N-glycan biosynthesisko00513deepkoala

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