Detailed information of g1028.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: CAH3035017.1, unnamed protein product [Porites lobata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
P09241Rhodopsin OS=Enteroctopus dofleini OX=267067 GN=RHO PE=2 SV=1
P31356Rhodopsin OS=Todarodes pacificus OX=6637 GN=RHO PE=1 SV=2
Q4U4D2Melanopsin OS=Podarcis siculus OX=65484 GN=OPN4 PE=2 SV=2
Gene familySubfamily
Ubiquitin FamilyUBD|Other|Beta-prp

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF000017tm_17 transmembrane receptor (rhodopsin family)FamilyInterproscan
PF03943TAP_CTAP C-terminal domainDomainInterproscan
PF09162Tap-RNA_bindTap, RNA-bindingDomainInterproscan
PF02136NTF2Nuclear transport factor 2 (NTF2) domainDomainInterproscan
PF13517FG-GAP_3FG-GAP-like repeatRepeatInterproscan
PF17767NAPRTase_NNicotinate phosphoribosyltransferase (NAPRTase) N-terminal domainDomainInterproscan
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF13650Asp_protease_2Aspartyl proteaseDomainInterproscan
PF14838INTS5_CIntegrator complex subunit 5 C-terminusFamilyInterproscan
PF00400WD40WD domain, G-beta repeatRepeatInterproscan
PF03881Fructosamin_kinFructosamine kinaseFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000276FamilyG protein-coupled receptor, rhodopsin-likeInterproscan
IPR017452DomainGPCR, rhodopsin-like, 7TMInterproscan
IPR050125FamilyG-protein coupled receptor opsinsInterproscan
IPR037386FamilyCoiled-coil domain-containing protein 40Interproscan
IPR005637DomainTAP C-terminal (TAP-C) domainInterproscan
IPR030217FamilyNuclear RNA export factorInterproscan
IPR015245DomainNuclear RNA export factor Tap, RNA-binding domainInterproscan
IPR001611RepeatLeucine-rich repeatInterproscan
IPR002075DomainNuclear transport factor 2 domainInterproscan
IPR032710Homologous_superfamilyNTF2-like domain superfamilyInterproscan
IPR032675Homologous_superfamilyLeucine-rich repeat domain superfamilyInterproscan
IPR009060Homologous_superfamilyUBA-like superfamilyInterproscan
IPR035979Homologous_superfamilyRNA-binding domain superfamilyInterproscan
IPR012677Homologous_superfamilyNucleotide-binding alpha-beta plait domain superfamilyInterproscan
IPR018222DomainNuclear transport factor 2, eukaryoteInterproscan
IPR028994Homologous_superfamilyIntegrin alpha, N-terminalInterproscan
IPR013517RepeatFG-GAP repeatInterproscan
IPR007229FamilyNicotinate phosphoribosyltransferase familyInterproscan
IPR040727DomainNicotinate phosphoribosyltransferase, N-terminal domainInterproscan
IPR000477DomainReverse transcriptase domainInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR001969Active_siteAspartic peptidase, active siteInterproscan
IPR021109Homologous_superfamilyAspartic peptidase domain superfamilyInterproscan
IPR029444DomainIntegrator complex subunit 5, C-terminalInterproscan
IPR040316FamilyIntegrator complex subunit 5Interproscan
IPR015943Homologous_superfamilyWD40/YVTN repeat-like-containing domain superfamilyInterproscan
IPR039857FamilyIntraflagellar transport protein 122/121 homologInterproscan
IPR001680RepeatWD40 repeatInterproscan
IPR036322Homologous_superfamilyWD40-repeat-containing domain superfamilyInterproscan
IPR016477FamilyFructosamine/Ketosamine-3-kinaseInterproscan
IPR011009Homologous_superfamilyProtein kinase-like domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24240OPSINInterproscan
PTHR16275COILED-COIL DOMAIN-CONTAINING PROTEIN 40Interproscan
PTHR10662NUCLEAR RNA EXPORT FACTORInterproscan
PTHR46580SENSOR KINASE-RELATEDInterproscan
PTHR11098NICOTINATE PHOSPHORIBOSYLTRANSFERASEInterproscan
PTHR19446REVERSE TRANSCRIPTASESInterproscan
PTHR22955RETROTRANSPOSONInterproscan
PTHR31697INTEGRATOR COMPLEX SUBUNIT 5Interproscan
PTHR12764WD REPEAT DOMAIN-RELATEDInterproscan
PTHR12149FRUCTOSAMINE 3 KINASE-RELATED PROTEINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0004930Molecular FunctionG protein-coupled receptor activityInterproscan
GO:0007186Biological ProcessG protein-coupled receptor signaling pathwayInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0005887Cellular Componentplasma membraneInterproscan
GO:0007602Biological ProcessphototransductionInterproscan
GO:0008020Molecular FunctionG protein-coupled photoreceptor activityInterproscan
GO:0071482Biological Processcellular response to light stimulusInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0035082Biological Processaxoneme assemblyInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0051028Biological ProcessmRNA transportInterproscan
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0016973Biological Processpoly(A)+ mRNA export from nucleusInterproscan
GO:0006406Biological ProcessmRNA export from nucleusInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0004516Molecular Functionnicotinate phosphoribosyltransferase activityInterproscan
GO:0005829Cellular ComponentcytosolInterproscan
GO:0034355Biological ProcessNAD salvageInterproscan
GO:0004190Molecular Functionaspartic-type endopeptidase activityInterproscan
GO:0006508Biological ProcessproteolysisInterproscan
GO:0032039Cellular Componentintegrator complexInterproscan
GO:0034472Biological ProcesssnRNA 3'-end processingInterproscan
GO:0030991Cellular Componentintraciliary transport particle AInterproscan
GO:0035721Biological Processintraciliary retrograde transportInterproscan
GO:0060271Biological Processcilium assemblyInterproscan
GO:0061512Biological Processprotein localization to ciliumInterproscan
GO:0097730Cellular Componentnon-motile ciliumInterproscan
GO:1905515Biological Processnon-motile cilium assemblyInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K19674WDR35, IFT121; WD repeat-containing protein 35-Ribosome biogenesisko03009deepkoala
Cilium and associated proteinsko03037deepkoala

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