Detailed information of g103.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: WP_076717168.1, TRAP transporter substrate-binding protein [Motiliproteus sp. MSK22-1]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
Q8YSQ6Monocarboxylate 2-oxoacid-binding periplasmic protein all3028 OS=Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576) OX=103690 GN=all3028 PE=1 SV=1
Q3J1R2Alpha-keto acid-binding periplasmic protein TakP OS=Cereibacter sphaeroides (strain ATCC 17023 / DSM 158 / JCM 6121 / CCUG 31486 / LMG 2827 / NBRC 12203 / NCIMB 8253 / ATH 2.4.1.) OX=272943 GN=takP PE=1 SV=1
Q5U5A6Notch-regulated ankyrin repeat-containing protein OS=Xenopus laevis OX=8355 GN=nrarp PE=1 SV=1
Gene familySubfamily
Transcription Factors FamilyHomeobox

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00046HomeodomainHomeodomainDomainInterproscan
PF00582UspUniversal stress protein familyDomainInterproscan
PF03480DctPBacterial extracellular solute-binding protein, family 7FamilyInterproscan
PF02145Rap_GAPRap/ran-GAPFamilyInterproscan
PF12796Ank_2Ankyrin repeats (3 copies)RepeatInterproscan
PF01465GRIPGRIP domainFamilyInterproscan
PF13418Kelch_4Galactose oxidase, central domainRepeatInterproscan
PF03067LPMO_10Lytic polysaccharide mono-oxygenase, cellulose-degradingDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR009057Homologous_superfamilyHomeobox-like domain superfamilyInterproscan
IPR017970Conserved_siteHomeobox, conserved siteInterproscan
IPR001356DomainHomeobox domainInterproscan
IPR050674FamilyMsh Homeobox Transcriptional RegulatorsInterproscan
IPR020479DomainHomeobox domain, metazoaInterproscan
IPR000047Conserved_siteHelix-turn-helix motifInterproscan
IPR006015FamilyUniversal stress protein A familyInterproscan
IPR014729Homologous_superfamilyRossmann-like alpha/beta/alpha sandwich foldInterproscan
IPR006016DomainUspAInterproscan
IPR051688FamilyUniversal stress protein AInterproscan
IPR018389FamilyTRAP transporter solute receptor DctPInterproscan
IPR026289FamilySolute binding protein, TakP-likeInterproscan
IPR038404Homologous_superfamilyTRAP transporter solute receptor DctP superfamilyInterproscan
IPR027107FamilyTuberin/Ral GTPase-activating protein subunit alphaInterproscan
IPR035974Homologous_superfamilyRap/Ran-GAP superfamilyInterproscan
IPR000331DomainRap/Ran-GAP domainInterproscan
IPR002110RepeatAnkyrin repeatInterproscan
IPR000237DomainGRIP domainInterproscan
IPR036770Homologous_superfamilyAnkyrin repeat-containing domain superfamilyInterproscan
IPR051952FamilyGolgi-associated and autophagy-related proteinInterproscan
IPR015915Homologous_superfamilyKelch-type beta propellerInterproscan
IPR052456FamilyCTLH complex component proteinInterproscan
IPR011043Homologous_superfamilyGalactose oxidase/kelch, beta-propellerInterproscan
IPR004302DomainCellulose/chitin-binding protein, N-terminalInterproscan
IPR052282FamilyStarch-active lytic polysaccharide monooxygenaseInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR47027REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR24338HOMEOBOX PROTEIN MSXInterproscan
PTHR43010UNIVERSAL STRESS PROTEIN SLR1230Interproscan
PTHR33376-Interproscan
PTHR10063TUBERINInterproscan
PTHR23157GRIP AND COILED-COIL DOMAIN-CONTAINING PROTEIN 1Interproscan
PTHR35169FE2OG DIOXYGENASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR15526MUSKELINInterproscan
PTHR36575BINDING PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_1G14430)-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0000981Molecular FunctionDNA-binding transcription factor activity, RNA polymerase II-specificInterproscan
GO:0006355Biological Processregulation of DNA-templated transcriptionInterproscan
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0000977Molecular FunctionRNA polymerase II transcription regulatory region sequence-specific DNA bindingInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006357Biological Processregulation of transcription by RNA polymerase IIInterproscan
GO:0048598Biological Processembryonic morphogenesisInterproscan
GO:0055085Biological Processtransmembrane transportInterproscan
GO:0031317Cellular Componenttripartite ATP-independent periplasmic transporter complexInterproscan
GO:0005096Molecular FunctionGTPase activator activityInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0032007Biological Processnegative regulation of TOR signalingInterproscan
GO:0033596Cellular ComponentTSC1-TSC2 complexInterproscan
GO:0043547Biological Processpositive regulation of GTPase activityInterproscan
GO:0051056Biological Processregulation of small GTPase mediated signal transductionInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005794Cellular ComponentGolgi apparatusInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K09341MSX; homeobox protein MSX-Transportersko02000deepkoala
Transcription factorsko03000deepkoala

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