Detailed information of g1030.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: XP_012565576.2, probable serine incorporator [Hydra vulgaris]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
A7S4N4Probable serine incorporator OS=Nematostella vectensis OX=45351 GN=serinc PE=3 SV=1
A4FUZ5Serine incorporator 3 OS=Bos taurus OX=9913 GN=SERINC3 PE=2 SV=1
Q9QZI9Serine incorporator 3 OS=Mus musculus OX=10090 GN=Serinc3 PE=1 SV=2
Gene familySubfamily
Ubiquitin FamilyUBD|Other|Beta-prp
Ubiquitin FamilyE3|E3 adaptor Cullin RING|CDC20
Ubiquitin FamilyE3|E3 adaptor Cullin RING|DWD

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF04515Choline_transpoPlasma-membrane choline transporterFamilyInterproscan
PF03348SerincSerine incorporator (Serinc)FamilyInterproscan
PF00007Cys_knotCystine-knot domainDomainInterproscan
PF14580LRR_9Leucine-rich repeatRepeatInterproscan
PF00400WD40WD domain, G-beta repeatRepeatInterproscan
PF16752TBCC_NTubulin-specific chaperone C N-terminal domainDomainInterproscan
PF000027tm_27 transmembrane receptor (Secretin family)FamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR032675Homologous_superfamilyLeucine-rich repeat domain superfamilyInterproscan
IPR043313FamilyLeucine-rich melanocyte differentiation-associated proteinInterproscan
IPR007603FamilyCholine transporter-likeInterproscan
IPR005016FamilySerine incorporator/TMS membrane proteinInterproscan
IPR006207DomainCystine knot, C-terminalInterproscan
IPR001007DomainVWFC domainInterproscan
IPR006208DomainGlycoprotein hormone subunit betaInterproscan
IPR001611RepeatLeucine-rich repeatInterproscan
IPR052414FamilyU3 small nucleolar RNA-associated WD repeat-containing proteinInterproscan
IPR001680RepeatWD40 repeatInterproscan
IPR015943Homologous_superfamilyWD40/YVTN repeat-like-containing domain superfamilyInterproscan
IPR036322Homologous_superfamilyWD40-repeat-containing domain superfamilyInterproscan
IPR038397Homologous_superfamilyTBCC, N-terminal domain superfamilyInterproscan
IPR027684FamilyTubulin-specific chaperone CInterproscan
IPR031925DomainTubulin-specific chaperone C, N-terminalInterproscan
IPR000832FamilyGPCR, family 2, secretin-likeInterproscan
IPR017981DomainGPCR, family 2-like, 7TMInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR46282LEUCINE-RICH MELANOCYTE DIFFERENTIATION-ASSOCIATED PROTEINInterproscan
PTHR12385CHOLINE TRANSPORTER-LIKE (SLC FAMILY 44)Interproscan
PTHR10383SERINE INCORPORATORInterproscan
PTHR15454NISCHARIN RELATEDInterproscan
PTHR44267WD REPEAT-CONTAINING PROTEIN 43Interproscan
PTHR15139TUBULIN FOLDING COFACTOR CInterproscan
PTHR12011ADHESION G-PROTEIN COUPLED RECEPTORInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0030318Biological Processmelanocyte differentiationInterproscan
GO:0022857Molecular Functiontransmembrane transporter activityInterproscan
GO:0055085Biological Processtransmembrane transportInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0036158Biological Processouter dynein arm assemblyInterproscan
GO:0043014Molecular Functionalpha-tubulin bindingInterproscan
GO:0045504Molecular Functiondynein heavy chain bindingInterproscan
GO:0000462Biological Processmaturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)Interproscan
GO:0005730Cellular ComponentnucleolusInterproscan
GO:0006457Biological Processprotein foldingInterproscan
GO:0007021Biological Processtubulin complex assemblyInterproscan
GO:0007023Biological Processpost-chaperonin tubulin folding pathwayInterproscan
GO:0015631Molecular Functiontubulin bindingInterproscan
GO:0004930Molecular FunctionG protein-coupled receptor activityInterproscan
GO:0007186Biological ProcessG protein-coupled receptor signaling pathwayInterproscan
GO:0005887Cellular Componentplasma membraneInterproscan
GO:0007189Biological Processadenylate cyclase-activating G protein-coupled receptor signaling pathwayInterproscan
GO:0004888Molecular Functiontransmembrane signaling receptor activityInterproscan
GO:0007166Biological Processcell surface receptor signaling pathwayInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K24399LRMDA; leucine-rich melanocyte differentiation-associated protein-Cytoskeleton proteinsko04812deepkoala
Signaling proteins-deepkoala

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