Detailed information of g1031.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: XP_047132290.1, talin-2 isoform X3 [Hydra vulgaris]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
Q9Y4G6Talin-2 OS=Homo sapiens OX=9606 GN=TLN2 PE=1 SV=4
P54939Talin-1 OS=Gallus gallus OX=9031 GN=TLN1 PE=1 SV=2
Q9Y490Talin-1 OS=Homo sapiens OX=9606 GN=TLN1 PE=1 SV=3
Gene familySubfamily
Ubiquitin FamilyUBD|Other|Beta-prp
Ubiquitin FamilyE3|E3 adaptor Cullin RING|CDC20
Ubiquitin FamilyE3|E3 adaptor Cullin RING|DWD

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF03644Glyco_hydro_85Glycosyl hydrolase family 85 FamilyInterproscan
PF00400WD40WD domain, G-beta repeatRepeatInterproscan
PF05907CXXC_Zn-b_eukCXXC motif containing zinc binding protein, eukaryoticFamilyInterproscan
PF04193PQ-loopPQ loop repeat RepeatInterproscan
PF01565FAD_binding_4FAD binding domain DomainInterproscan
PF02913FAD-oxidase_CFAD linked oxidases, C-terminal domainDomainInterproscan
PF00415RCC1Regulator of chromosome condensation (RCC1) repeatRepeatInterproscan
PF09141Talin_middleTalin, middle domainDomainInterproscan
PF02174IRSPTB domain (IRS-1 type)DomainInterproscan
PF08913VBSVinculin Binding SiteDomainInterproscan
PF21692Talin_R4Talin, R4 domainDomainInterproscan
PF00373FERM_MFERM central domainDomainInterproscan
PF01608I_LWEQI/LWEQ domainFamilyInterproscan
PF00160Pro_isomeraseCyclophilin type peptidyl-prolyl cis-trans isomerase/CLDDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR032979FamilyCytosolic endo-beta-N-acetylglucosaminidaseInterproscan
IPR005201DomainGlycoside hydrolase, family 85Interproscan
IPR019775Conserved_siteWD40 repeat, conserved siteInterproscan
IPR011047Homologous_superfamilyQuinoprotein alcohol dehydrogenase-like superfamilyInterproscan
IPR001680RepeatWD40 repeatInterproscan
IPR015943Homologous_superfamilyWD40/YVTN repeat-like-containing domain superfamilyInterproscan
IPR020472RepeatG-protein beta WD-40 repeatInterproscan
IPR008584FamilyCXXC motif containing zinc binding protein, eukaryoticInterproscan
IPR016817FamilyMannose-P-dolichol utilization defect 1 proteinInterproscan
IPR006603RepeatPQ-loop repeatInterproscan
IPR016167Homologous_superfamilyFAD-binding, type PCMH, subdomain 1Interproscan
IPR006094DomainFAD linked oxidase, N-terminalInterproscan
IPR016169Homologous_superfamilyFAD-binding, type PCMH, subdomain 2Interproscan
IPR036318Homologous_superfamilyFAD-binding, type PCMH-like superfamilyInterproscan
IPR016166DomainFAD-binding domain, PCMH-typeInterproscan
IPR004113DomainFAD-binding oxidoreductase/transferase, type 4, C-terminalInterproscan
IPR016164Homologous_superfamilyFAD-linked oxidase-like, C-terminalInterproscan
IPR016171Homologous_superfamilyVanillyl-alcohol oxidase, C-terminal subdomain 2Interproscan
IPR051264FamilyFAD-binding Oxidoreductase/Transferase Type 4Interproscan
IPR051997FamilySerine/threonine-protein kinase NEKInterproscan
IPR000408RepeatRegulator of chromosome condensation, RCC1Interproscan
IPR009091Homologous_superfamilyRegulator of chromosome condensation 1/beta-lactamase-inhibitor protein IIInterproscan
IPR019747Conserved_siteFERM conserved siteInterproscan
IPR035963Homologous_superfamilyFERM superfamily, second domainInterproscan
IPR035964Homologous_superfamilyI/LWEQ domain superfamilyInterproscan
IPR000299DomainFERM domainInterproscan
IPR002558DomainI/LWEQ domainInterproscan
IPR015224DomainTalin, centralInterproscan
IPR002404DomainIRS-type PTB domainInterproscan
IPR036476Homologous_superfamilyTalin, central domain superfamilyInterproscan
IPR036723Homologous_superfamilyAlpha-catenin/vinculin-like superfamilyInterproscan
IPR015009DomainVinculin-binding site-containing domainInterproscan
IPR049108DomainTalin, R4 domainInterproscan
IPR019749DomainBand 4.1 domainInterproscan
IPR019748DomainFERM central domainInterproscan
IPR037438DomainTalin-1/2, rod-segmentInterproscan
IPR014352Homologous_superfamilyFERM/acyl-CoA-binding protein superfamilyInterproscan
IPR011993Homologous_superfamilyPH-like domain superfamilyInterproscan
IPR020892Conserved_siteCyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved siteInterproscan
IPR029000Homologous_superfamilyCyclophilin-like domain superfamilyInterproscan
IPR044666FamilyCyclophilin-type peptidyl-prolyl cis-trans isomerase, cyclophilin A-likeInterproscan
IPR002130DomainCyclophilin-type peptidyl-prolyl cis-trans isomerase domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR13246ENDO BETA N-ACETYLGLUCOSAMINIDASEInterproscan
PTHR19849PHOSPHOLIPASE A-2-ACTIVATING PROTEINInterproscan
PTHR12857UNCHARACTERIZEDInterproscan
PTHR12226MANNOSE-P-DOLICHOL UTILIZATION DEFECT 1 LEC35 -RELATEDInterproscan
PTHR43716D-2-HYDROXYGLUTARATE DEHYDROGENASE, MITOCHONDRIALInterproscan
PTHR44535PROTEIN CBG16200Interproscan
PTHR19981TALINInterproscan
PTHR45625PEPTIDYL-PROLYL CIS-TRANS ISOMERASE-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0004553Molecular Functionhydrolase activity, hydrolyzing O-glycosyl compoundsInterproscan
GO:0006517Biological Processprotein deglycosylationInterproscan
GO:0033925Molecular Functionmannosyl-glycoprotein endo-beta-N-acetylglucosaminidase activityInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan
GO:0050660Molecular Functionflavin adenine dinucleotide bindingInterproscan
GO:0071949Molecular FunctionFAD bindingInterproscan
GO:0003824Molecular Functioncatalytic activityInterproscan
GO:0005739Cellular ComponentmitochondrionInterproscan
GO:0003779Molecular Functionactin bindingInterproscan
GO:0005856Cellular ComponentcytoskeletonInterproscan
GO:0001726Cellular ComponentruffleInterproscan
GO:0005200Molecular Functionstructural constituent of cytoskeletonInterproscan
GO:0005925Cellular Componentfocal adhesionInterproscan
GO:0007155Biological Processcell adhesionInterproscan
GO:0051015Molecular Functionactin filament bindingInterproscan
GO:0005178Molecular Functionintegrin bindingInterproscan
GO:0005886Cellular Componentplasma membraneInterproscan
GO:0098609Biological Processcell-cell adhesionInterproscan
GO:0003755Molecular Functionpeptidyl-prolyl cis-trans isomerase activityInterproscan
GO:0006457Biological Processprotein foldingInterproscan
GO:0000413Biological Processprotein peptidyl-prolyl isomerizationInterproscan
GO:0071013Cellular Componentcatalytic step 2 spliceosomeInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K09336VSX2, CHX10; visual system homeobox protein 2-Exosomeko04147deepkoala
Other glycan degradationko00511deepkoala
Glycosyltransferasesko01003deepkoala
Chaperones and folding catalystsko03110deepkoala
Domain-containing proteins not elsewhere classifiedko04990deepkoala
Transcription factorsko03000deepkoala

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