Detailed information of g1032.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: XP_027059740.1, E3 ubiquitin-protein ligase rnf168-like [Pocillopora damicornis]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
B9LZ84ATP synthase subunit beta OS=Geotalea daltonii (strain DSM 22248 / JCM 15807 / FRC-32) OX=316067 GN=atpD PE=3 SV=1
Q39Q56ATP synthase subunit beta OS=Geobacter metallireducens (strain ATCC 53774 / DSM 7210 / GS-15) OX=269799 GN=atpD PE=3 SV=1
Q74GY0ATP synthase subunit beta OS=Geobacter sulfurreducens (strain ATCC 51573 / DSM 12127 / PCA) OX=243231 GN=atpD PE=3 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF02874ATP-synt_ab_NATP synthase alpha/beta family, beta-barrel domainDomainInterproscan
PF00006ATP-synt_abATP synthase alpha/beta family, nucleotide-binding domainDomainInterproscan
PF01391CollagenCollagen triple helix repeat (20 copies)RepeatInterproscan
PF00694Aconitase_CAconitase C-terminal domainDomainInterproscan
PF05970PIF1PIF1-like helicaseFamilyInterproscan
PF00956NAPNucleosome assembly protein (NAP)FamilyInterproscan
PF13432TPR_16Tetratricopeptide repeatRepeatInterproscan
PF00230MIPMajor intrinsic proteinFamilyInterproscan
PF00106adh_shortshort chain dehydrogenaseDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR003593DomainAAA+ ATPase domainInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR004100DomainATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domainInterproscan
IPR024034Homologous_superfamilyATPase, F1/V1 complex, beta/alpha subunit, C-terminalInterproscan
IPR005722FamilyATP synthase, F1 complex, beta subunitInterproscan
IPR020003Active_siteATPase, alpha/beta subunit, nucleotide-binding domain, active siteInterproscan
IPR050053FamilyATPase alpha/beta chainsInterproscan
IPR036121Homologous_superfamilyATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamilyInterproscan
IPR000194DomainATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domainInterproscan
IPR050149FamilyCollagen superfamilyInterproscan
IPR008160RepeatCollagen triple helix repeatInterproscan
IPR050075Family3-isopropylmalate dehydratase small subunitInterproscan
IPR033940Domain3-isopropylmalate dehydratase, swivel domainInterproscan
IPR000573DomainAconitase A/isopropylmalate dehydratase small subunit, swivel domainInterproscan
IPR004431Family3-isopropylmalate dehydratase, small subunitInterproscan
IPR015928Homologous_superfamilyAconitase/3-isopropylmalate dehydratase, swivelInterproscan
IPR051055FamilyPIF1 DNA helicaseInterproscan
IPR010285FamilyDNA helicase Pif1-likeInterproscan
IPR002164FamilyNucleosome assembly protein (NAP)Interproscan
IPR037231Homologous_superfamilyNAP-like superfamilyInterproscan
IPR011990Homologous_superfamilyTetratricopeptide-like helical domain superfamilyInterproscan
IPR019734RepeatTetratricopeptide repeatInterproscan
IPR051727FamilyDnaJ Homolog Subfamily C Member 3 Co-ChaperonesInterproscan
IPR000425FamilyMajor intrinsic proteinInterproscan
IPR023271Homologous_superfamilyAquaporin-likeInterproscan
IPR034294FamilyAquaporin transporterInterproscan
IPR002347FamilyShort-chain dehydrogenase/reductase SDRInterproscan
IPR036291Homologous_superfamilyNAD(P)-binding domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR15184ATP SYNTHASEInterproscan
PTHR24023COLLAGEN ALPHAInterproscan
PTHR433453-ISOPROPYLMALATE DEHYDRATASE SMALL SUBUNIT 2-RELATED-RELATEDInterproscan
PTHR47642ATP-DEPENDENT DNA HELICASEInterproscan
PTHR11875TESTIS-SPECIFIC Y-ENCODED PROTEINInterproscan
PTHR44140LD25575PInterproscan
PTHR19139AQUAPORIN TRANSPORTERInterproscan
PTHR44196DEHYDROGENASE/REDUCTASE SDR FAMILY MEMBER 7BInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0016887Molecular FunctionATP hydrolysis activityInterproscan
GO:0046034Biological ProcessATP metabolic processInterproscan
GO:1902600Biological Processproton transmembrane transportInterproscan
GO:0015986Biological Processproton motive force-driven ATP synthesisInterproscan
GO:0045261Cellular Componentproton-transporting ATP synthase complex, catalytic core F(1)Interproscan
GO:0046933Molecular Functionproton-transporting ATP synthase activity, rotational mechanismInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0005615Cellular Componentextracellular spaceInterproscan
GO:0030020Molecular Functionextracellular matrix structural constituent conferring tensile strengthInterproscan
GO:0030198Biological Processextracellular matrix organizationInterproscan
GO:0031012Cellular Componentextracellular matrixInterproscan
GO:0062023Cellular Componentcollagen-containing extracellular matrixInterproscan
GO:0003861Molecular Function3-isopropylmalate dehydratase activityInterproscan
GO:0009098Biological ProcessL-leucine biosynthetic processInterproscan
GO:0009316Cellular Component3-isopropylmalate dehydratase complexInterproscan
GO:0000723Biological Processtelomere maintenanceInterproscan
GO:0003678Molecular FunctionDNA helicase activityInterproscan
GO:0006281Biological ProcessDNA repairInterproscan
GO:0000785Cellular ComponentchromatinInterproscan
GO:0003682Molecular Functionchromatin bindingInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006334Biological Processnucleosome assemblyInterproscan
GO:0042393Molecular Functionhistone bindingInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005783Cellular Componentendoplasmic reticulumInterproscan
GO:0034975Biological Processprotein folding in endoplasmic reticulumInterproscan
GO:0051087Molecular Functionprotein-folding chaperone bindingInterproscan
GO:0051787Molecular Functionmisfolded protein bindingInterproscan
GO:0015267Molecular Functionchannel activityInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0055085Biological Processtransmembrane transportInterproscan
GO:0005886Cellular Componentplasma membraneInterproscan
GO:0006833Biological Processwater transportInterproscan
GO:0015250Molecular Functionwater channel activityInterproscan
GO:0016021Cellular ComponentmembraneInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K01704leuD, IPMI-S; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunitEC:4.2.1.33
EC:4.2.1.35
Photosynthesis proteinsko00194deepkoala
Chromosome and associated proteinsko03036deepkoala
Valine, leucine and isoleucine biosynthesisko00290deepkoala

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